| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2899 |
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| Symbol | cse1 |
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| ID | 5592515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 2899863 |
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| End bp | 2901371 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640922016 |
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| Product | hypothetical protein |
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| Protein accession | YP_001459527 |
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| Protein GI | 157162209 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 0.550415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTGC TTATTGATAA CTGGATCCCT GTACGCCCGC AAAGTGGGGG GAAAGTCCAA
ATCATAAATC TGCAATCGCT ATTCTGCAGT AAAAATCAGT GGCGGTTAAG TTTGCCCCGT
GACGATATGG AACTGGCCGC TTTAGCTCTG CTGGTTTGCA TCGGGCAAAT TATCGCCCCT
GCAAAAGATG ACGTTGAATT TCGGCATCGC ATTATGAATC CGCTCAGTGA AGATGAGTTT
CAACGACTCA TCGCGCCGTG GATAGATATG TTCTACCTTA ATCACGCAGA ACATCCCTTT
ATGCAGACCA AAGGTGTTAA AGCAAATGAT GTGACTCCAA TGGAAAAACT GTTGGCTGGG
GTAAGCGGCG CGACGAATTG TGCATTTGTC AATCAACCGG GTCAGGGTGA AGCATTATGT
GGTGGATGCA CTGCGATTGC GTTATTCAAC CAGGCGAATC AGGCACCTGG TTTTGGTGGT
GGCTTTAAAA GCGGTTTACG TGGAGGAACA CCTATAACCA CCTTCGTACG TGGGATCGAT
CTTCGCTCGA CGGTGTTACT CAATGTCCTC ACAATACCTC GTCTCCAAAA ACAATTTCCC
AATGAATCAC ATACGGAAAA CCAACCTACC TGGATTAAGC CTGTCAAGCC CAATGAATCT
GTGCCAGCTT CGTCAATTGG CTTTGTCCGT GGCTTATTCT GGCAACCAGC GCATATTGAA
TTATGCGATC CCATTGGGAT TGGTAAATGT TCTTGCTGTG GACAGGAAAG CAATTTGCGT
TATACCGGTT TTCTTAAGGA AAAATTTACC TTTACAGTTA ATGGGCTATG GCCCCATCCG
CATTCCCCTT GTCTGGTAAC AGTCAAGAAA GGGGAGGTTG AGGAAAAATT TCTTGCTTTC
ACCACCTCCG CACCATCATG GACACAAATC AGCCGAGTTG TGGTAGATAA AATTATTCAA
AATGAAAATG GAAATCGCGT GGCGGCGGTT GTGAATCAAT TCAGAAATAT TGCGTCGCAA
AGTCCTCTTG AATTGATTAT GGGGGGATAT CGTAATAATC AAGCATCTAT TCTTGAACGG
CGTCATGATG TGCTGATGTT TAATCAGGGA TGGCAACAAT ACGGCAATGT GATAAACGAA
ATAGTGACTG TTGGTTTGGG ATATAAAACA GCCTTACGCA AGGCGTTATA TACCTTTGCA
GAAGGGTTTA AAAATAAAGA CTTCAAAGGG GCCGGAGTCT CTGTTCATGA GACTGCAGAA
AGGCATTTCT ATCGCCAGAG TGAATTATTA ATTCTCGATG TACTGGCGAA TATTAATTTT
TCCCAGGCTG ATGAGGTAAT AGCTGATTTA CGAGACAAAC TTCATCAATT GTGTGAAATG
CTATTTAATC AATCTGTAGC GCCCTATGCA CATCATCCTA AATTAATAAG CACATTAGCG
CTTGCCCGCG CCACGCTATA CAAACATTTA CGGGAGTTAA AACCGCAAGG AGGGCCATCA
AATGGCTGA
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| Protein sequence | MNLLIDNWIP VRPQSGGKVQ IINLQSLFCS KNQWRLSLPR DDMELAALAL LVCIGQIIAP
AKDDVEFRHR IMNPLSEDEF QRLIAPWIDM FYLNHAEHPF MQTKGVKAND VTPMEKLLAG
VSGATNCAFV NQPGQGEALC GGCTAIALFN QANQAPGFGG GFKSGLRGGT PITTFVRGID
LRSTVLLNVL TIPRLQKQFP NESHTENQPT WIKPVKPNES VPASSIGFVR GLFWQPAHIE
LCDPIGIGKC SCCGQESNLR YTGFLKEKFT FTVNGLWPHP HSPCLVTVKK GEVEEKFLAF
TTSAPSWTQI SRVVVDKIIQ NENGNRVAAV VNQFRNIASQ SPLELIMGGY RNNQASILER
RHDVLMFNQG WQQYGNVINE IVTVGLGYKT ALRKALYTFA EGFKNKDFKG AGVSVHETAE
RHFYRQSELL ILDVLANINF SQADEVIADL RDKLHQLCEM LFNQSVAPYA HHPKLISTLA
LARATLYKHL RELKPQGGPS NG
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