Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2858 |
Symbol | hycD |
ID | 5591209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 2863907 |
End bp | 2864830 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640921975 |
Product | formate hydrogenlyase, subunit D |
Protein accession | YP_001459486 |
Protein GI | 157162168 |
COG category | [C] Energy production and conversion |
COG ID | [COG0650] Formate hydrogenlyase subunit 4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 82 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGTTT TATATCCGTT AATTCAGGCG CTGGTGTTAT TTGCCGTTGC GCCGCTGCTC TCCGGTATAA CCCGCGTGGC GCGCGCCCGC TTGCATAACC GTCGCGGGCC GGGCGTGTTG CAGGAGTATC GCGACATTAT CAAACTGCTG GGGCGTCAGA GCGTCGGCCC GGATGCCTCC GGCTGGGTGT TCCGCCTGAC GCCGTATGTG ATGGTGGGCG TCATGCTGAC TATCGCTACT GCGCTGCCGG TGGTGACCGT CGGTTCTCCG CTGCCGCAAC TGGGTGATTT GATCACCTTA CTGTATCTCT TTGCCATCGC GCGTTTCTTC TTTGCCATTT CTGGTCTGGA TACCGGTAGC CCGTTTACCG CTATCGGCGC GAGCCGTGAA GCGATGCTTG GCGTGCTGGT CGAACCGATG CTGCTGCTTG GTCTGTGGGT TGCCGCACAG GTTGCCGGTT CCACCAACAT CAGCAACATC ACCGACACCG TTTATCACTG GCCGCTGAGC CAGAGCATCC CGCTGGTACT GGCGCTTTGT GCCTGTGCGT TCGCCACCTT TATCGAAATG GGCAAACTGC CGTTCGACCT GGCGGAAGCC GAGCAGGAGC TGCAGGAAGG CCCGCTCTCT GAATACAGCG GCAGCGGCTT TGGCGTCATG AAATGGGGTA TCAGCCTGAA ACAGCTGGTG GTGTTGCAGA TGTTCGTCGG GGTGTTTATT CCGTGGGGAC AAATGGAAAC CTTCACCGCC GGTGGACTGC TGCTGGCGCT GGTGATTGCC ATCGTAAAAC TGGTGGTCGG CGTCCTGGTT ATCGCGCTGT TCGAAAACAG CATGGCCCGT CTGCGTCTTG ATATTACTCC GCGCATTACC TGGGCTGGGT TTGGCTTTGC ATTTTTAGCG TTCGTCTCCT TGCTGGCGGC GTGA
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Protein sequence | MSVLYPLIQA LVLFAVAPLL SGITRVARAR LHNRRGPGVL QEYRDIIKLL GRQSVGPDAS GWVFRLTPYV MVGVMLTIAT ALPVVTVGSP LPQLGDLITL LYLFAIARFF FAISGLDTGS PFTAIGASRE AMLGVLVEPM LLLGLWVAAQ VAGSTNISNI TDTVYHWPLS QSIPLVLALC ACAFATFIEM GKLPFDLAEA EQELQEGPLS EYSGSGFGVM KWGISLKQLV VLQMFVGVFI PWGQMETFTA GGLLLALVIA IVKLVVGVLV IALFENSMAR LRLDITPRIT WAGFGFAFLA FVSLLAA
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