Gene EcHS_A2609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2609 
Symbol 
ID5590920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2619738 
End bp2620772 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content55% 
IMG OID640921730 
Productlipoprotein 
Protein accessionYP_001459257 
Protein GI157161939 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3317] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTACT CTGTTCAAAA GTCGCGCCTG GCAAAGGTTG CGGGTGTTTC GCTTGTTTTA 
TTACTCGCTG CCTGTAGTTC TGACTCACGC TATAAGCGTC AGGTCAGTGG TGATGAAGCC
TACCTGGAAG CGGCACCGCT TGCGGAGCTT CATGCCCCGG CTGGAATGAT TTTGCCGGTG
ACCTCCGGTG ATTATGCAAT CCCGGTGACC AACGGTAGTG GTGCTGTCGG TAAGGCGCTG
GACATTCGTC CACCAGCCCA GCCGCTGGCA CTGGTTTCTG GCGCGCGTAC CCAGTTCACG
GGCGATACCG CTTCATTGCT GGTGGAAAAT GGTCGTGGCA ATACTCTGTG GCCGCAGGTG
GTTAGCGTGC TGCAGGCGAA AAACTACACC ATCACCCAAC GTGATGATGC TGGTCAGACA
CTGACCACCG ATTGGGTACA ATGGAACCGT CTGGACGAAG ACGAGCAGTA TCGTGGTCGT
TATCAAATCT CTGTTAAGCC GCAGGGTTAT CAGCAGGCGG TTACGGTTAA ACTGCTGAAC
CTGGAACAGG CGGGCAAACC GGTTGCAGAC GCGGCTTCCA TGCAGCGTTA CAGCACGGAG
ATGATGAACG TTATTTCCGC CGGTCTGGAT AAATCTGCCA CTGACGCCGC GAACGCTGCG
CAAAATCGTG CCTCCACCAC TATGGACGTA CAAAGTGCAG CTGATGACAC CGGTTTACCA
ATGCTGGTCG TACGCGGGCC GTTCAATGTG GTTTGGCAAC GTCTGCCAGC GGCGCTGGAA
AAAGTGGGCA TGAAAGTGAC CGACAGCACC CGTTCGCAGG GCAACATGGC CGTAACTTAT
AAGCCGCTGT CTGACAGCGA CTGGCAGGAA CTGGGCGCGA GCGATCCAGG CCTGGCATCC
GGTGACTATA AACTGCAGGT TGGCGATTTA GATAACCGCA GCAGCCTACA GTTCATCGAT
CCGAAAGGTC ATACTCTGAC TCAGAGTCAG AACGACGCGC TGGTAGCTGT CTTCCAGGCT
GCGTTTAGCA AGTAA
 
Protein sequence
MAYSVQKSRL AKVAGVSLVL LLAACSSDSR YKRQVSGDEA YLEAAPLAEL HAPAGMILPV 
TSGDYAIPVT NGSGAVGKAL DIRPPAQPLA LVSGARTQFT GDTASLLVEN GRGNTLWPQV
VSVLQAKNYT ITQRDDAGQT LTTDWVQWNR LDEDEQYRGR YQISVKPQGY QQAVTVKLLN
LEQAGKPVAD AASMQRYSTE MMNVISAGLD KSATDAANAA QNRASTTMDV QSAADDTGLP
MLVVRGPFNV VWQRLPAALE KVGMKVTDST RSQGNMAVTY KPLSDSDWQE LGASDPGLAS
GDYKLQVGDL DNRSSLQFID PKGHTLTQSQ NDALVAVFQA AFSK