| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2553 |
|---|
| Symbol | pdxK |
|---|
| ID | 5594177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 2563950 |
|---|
| End bp | 2564801 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640921674 |
|---|
| Product | pyridoxal kinase |
|---|
| Protein accession | YP_001459201 |
|---|
| Protein GI | 157161883 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase |
|---|
| TIGRFAM ID | [TIGR00687] pyridoxal kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.000166037 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGTT TGTTGTTGTT TAACGATAAG AGTAGGGCAC TGCAGGCGGA TATCGTCGCC
GTGCAGTCGC AGGTGGTTTA CGGCAGCGTG GGCAACAGCA TTGCCGTGCC TGCTATCAAA
CAGAACGGCC TGAATGTCTT TGCCGTGCCG ACGGTATTGC TGAGCAATAC GCCGCATTAT
GACACTTTCT ACGGTGGTGC GATTCCGGAC GAATGGTTTA GCGGCTATTT GCGTGCGCTT
CAGGAGCGTG ATGCGCTGCG CCAACTTCGT GCTGTAACCA CGGGCTATAT GGGAACGGCA
TCGCAAATCA AAATCCTTGC CGAGTGGCTG ACTGCGCTAC GCAAAGACCA TCCTGACCTA
TTGATCATGG TCGATCCGGT GATTGGCGAT ATTGATAGCG GAATTTATGT CAAACCTGAC
CTTCCCGAAG CGTATCGACA ATATTTACTG CCGCTGGCGC AGGGAATTAC CCCCAATATC
TTTGAGTTGG AAATCCTGAC CGGTAAAAAT TGCCGCGATC TCGACAGTGC CATTGCTGCC
GCAAAAAGTC TGCTTTCAGA CACATTAAAA TGGGTGGTGG TTACCAGCGC CTCCGGTAAT
GAAGAAAATC AGGAGATGCA GGTTGTGGTG GTCACTGCCG ACAGCGTGAA TGTCATTTCC
CATTCACGGG TAAAAACCGA CCTGAAAGGG ACTGGCGACC TGTTTTGTGC TCAGCTCATC
AGTGGCTTGC TGAAAGGGAA GGCGTTAACC GATGCAGTGC ACCGAGCGGG GTTGCGCGTA
CTGGAAGTGA TGCGCTACAC CCAGCAGCAT GAGAGCGATG AATTGATTTT GCCGCCGCTG
GCGGAAGCAT AA
|
|---|
| Protein sequence | MSSLLLFNDK SRALQADIVA VQSQVVYGSV GNSIAVPAIK QNGLNVFAVP TVLLSNTPHY
DTFYGGAIPD EWFSGYLRAL QERDALRQLR AVTTGYMGTA SQIKILAEWL TALRKDHPDL
LIMVDPVIGD IDSGIYVKPD LPEAYRQYLL PLAQGITPNI FELEILTGKN CRDLDSAIAA
AKSLLSDTLK WVVVTSASGN EENQEMQVVV VTADSVNVIS HSRVKTDLKG TGDLFCAQLI
SGLLKGKALT DAVHRAGLRV LEVMRYTQQH ESDELILPPL AEA
|
|---|
| |