Gene EcHS_A2543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2543 
Symbol 
ID5595116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2553494 
End bp2554420 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content54% 
IMG OID640921664 
ProductLysR family transcriptional regulator 
Protein accessionYP_001459191 
Protein GI157161873 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.81621e-13 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATT CTTTAAAACA ATTAAAGGTT TTCGTCACAG TAGCGCAGGA GAAAAGTTTT 
AGTCGTGCAG GAGAGCGTAT CGGCCTGAGC CAGTCGGCAG TGAGTCACAG TGTGAAGGAA
CTGGAAAATC ATACTGGTGT TCGCCTGCTG GACAGAACCA CGCGTGAAGT GGTGCTTACA
GATGCAGGGC AGCAGCTGGC TTTGCGTCTT GAGCGACTGC TGGATGAACT GAACAGCACG
TTGCGCGATA CCGGGCGTAT GGGGCAACAA CTGAGCGGAA AAGTTCGGGT CGCTGCCAGC
CAGACCATTT CCGCGCATCT TATTCCGCAA TGCATTGCTG AAAGCCATCG CCGCTATCCA
GATATTCAGT TTGTCCTGCA CGATCGTCCG CAGCAGTGGG TAATGGAAAG TATTCGCCAG
GGAGATGTCG ATTTTGGCAT CGTCATCGAT CCAGGCCCAG TGGGCGATCT GCAATGTGAA
GCGATTCTTT CCGAGCCTTT CTTTCTGCTT TGCCATCGCG ATAGCGCTTT GGCCGTGGAA
GATTATGTAC CCTGGCAGGC ATTACAGGGA GCGAAATTGG TGTTGCAGGA TTACGCGTCA
GGCAGCCGAC CGCTGATTGA CGCAGCGCTG GCGCGCAATG GTATTCAGGC GAATATTGTG
CAGGAGATTG GACATCCGGC GACGCTGTTC CCGATGGTAG CCGCAGGCAT CGGCATCAGT
ATTCTTCCCG CACTGGCGCT ACCATTGCCT GAAGGTAGCC CACTGGTGGT ACAGCGCATT
ACGCCGGTTG TTGAACGCCA GTTGATGCTG GTGCGCAGGA AGAACCGTTC ACTTTCCACC
GCCGCTGAAG CGTTATGGGA CGTGGTACGA GACCAGGGCA ATGCGCTAAT GGCTGGTCGG
GAAGGGGATC CGTTGTATCA GATATAG
 
Protein sequence
MNYSLKQLKV FVTVAQEKSF SRAGERIGLS QSAVSHSVKE LENHTGVRLL DRTTREVVLT 
DAGQQLALRL ERLLDELNST LRDTGRMGQQ LSGKVRVAAS QTISAHLIPQ CIAESHRRYP
DIQFVLHDRP QQWVMESIRQ GDVDFGIVID PGPVGDLQCE AILSEPFFLL CHRDSALAVE
DYVPWQALQG AKLVLQDYAS GSRPLIDAAL ARNGIQANIV QEIGHPATLF PMVAAGIGIS
ILPALALPLP EGSPLVVQRI TPVVERQLML VRRKNRSLST AAEALWDVVR DQGNALMAGR
EGDPLYQI