Gene EcHS_A2449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2449 
Symbol 
ID5593266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand- 
Start bp2460205 
End bp2460747 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content53% 
IMG OID640921571 
ProductNUDIX family hydrolase 
Protein accessionYP_001459105 
Protein GI157161787 
COG category[I] Lipid transport and metabolism 
COG ID[COG1443] Isopentenyldiphosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value2.25281e-18 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGC GTCGTTTGGC AAGTACTGAA TGGGTGGATA TTGTCAATGA AGAGAACGAA 
GTCATTGCAC AAGCCAGCCG GGAACAAATG CGGGCACAGT GTCTGCGTCA TCGTGCAACT 
TACATCGTCG TGCATGATGG CATGGGCAAA ATTCTGGTCC AGCGTCGTAC CGAGACAAAA 
GACTTTTTAC CCGGCATGTT AGATGCGACC GCAGGCGGTG TAGTCCAGGC CGATGAGCAA 
CTGCTGGAAT CCGCGCGTCG CGAAGCGGAA GAAGAGTTGG GCATTGCCGG TGTCCCCTTT 
GCCGAGCACG GGCAGTTCTA TTTCGAAGAT AAAAATTGCC GTGTCTGGGG CGCATTGTTC 
AGCTGCGTCT CTCACGGTCC CTTCGCACTA CAGGAAGATG AAGTCAGTGA AGTTTGCTGG 
CTGACGCCGG AAGAAATCAC CGCACGCTGC GATGAGTTCA CTCCAGACTC GCTGAAAGCG 
CTAGCGTTGT GGATGAAGCG CAATGCCAAA AATGAAGCCG TAGAGACTGA AACGGCAGAA 
TGA
 
Protein sequence
MEQRRLASTE WVDIVNEENE VIAQASREQM RAQCLRHRAT YIVVHDGMGK ILVQRRTETK 
DFLPGMLDAT AGGVVQADEQ LLESARREAE EELGIAGVPF AEHGQFYFED KNCRVWGALF 
SCVSHGPFAL QEDEVSEVCW LTPEEITARC DEFTPDSLKA LALWMKRNAK NEAVETETAE