Gene EcHS_A2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2417 
Symbol 
ID5594770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2424186 
End bp2424461 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content53% 
IMG OID640921541 
ProductIS1, transposase orfA 
Protein accessionYP_001459075 
Protein GI157161757 
COG category[L] Replication, recombination and repair 
COG ID[COG3677] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.0743259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTTCTG TTTCTATCAG CTGTCCCTCC TGTTCAGCTA CTGACGGGGT GGTGCGTAAC 
GGCAAAAGCA CCGCCGGACA TCAGCGCTAT CTCTGCTCTC ACTGCCGTAA AACATGGCAA
CTGCAGTTCA CTTACACCGC TTCTCAACCC GGTACGCACC AGAAAATCAT TGATATGGCC
ATGAATGGCG TTGGATGCCG GGCAACTGCC CGCATTATGG GCGTTGGCCT CAACACGATT
TTACGTCACT TAAAAAACTC AGGCCGCAGT CGGTAA
 
Protein sequence
MASVSISCPS CSATDGVVRN GKSTAGHQRY LCSHCRKTWQ LQFTYTASQP GTHQKIIDMA 
MNGVGCRATA RIMGVGLNTI LRHLKNSGRS R