| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2398 |
|---|
| Symbol | arnB |
|---|
| ID | 5592437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 2406715 |
|---|
| End bp | 2407854 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640921523 |
|---|
| Product | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase |
|---|
| Protein accession | YP_001459057 |
|---|
| Protein GI | 157161739 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 0.569967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAT TTTTGCCTTT TTCGCGACCA GCAATGGGCG TGGAGGAACT CGCTGCAGTT
AAAGAGGTTC TCGAATCCGG TTGGATCACA ACCGGTCCGA AGAATCAGGC GCTTGAGCAA
GCCTTTTGCC AGTTGACGGG AAATCAGCAT GCCATCGCGG TCAGTTCAGC CACCGCCGGA
ATGCATATCA CGCTAATGGC GTTGAAAATT GGCAAGGGCG ATGAAGTGAT TACGCCTTCC
CTGACTTGGG TTTCAACCCT CAATATGATT TCCTTGTTGG GTGCAACGCC GGTAATGGTG
GATGTCGACC GCGATACGCT GATGGTCACG CCTGAAGCTA TCGAGTCAGC CATTACGCCA
CGCACTAAAG CCATCATTCC GGTGCATTAT GCCGGTGCGC CAGCAGACAT TGACGCCATT
CGCGCCATTG GCGAACGTTA CGGCATCGCA GTTATCGAAG ATGCTGCCCA TGCCGTCGGT
ACGTATTACA AAGGGCGACA TATTGGCGCA AAAGGTACCG CTATTTTTTC GTTTCATGCC
ATCAAAAATA TTACCTGTGC GGAAGGTGGC CTGATTGTTA CTGATAATGA AAATCTTGCC
CGCCAGCTAC GGATGCTGAA ATTTCACGGT CTGGGTGTCG ATGCCTATGA CAGACAAACC
TGGGGTCGTG CACCGCAGGC TGAAGTATTA ACGCCGGGCT ATAAGTACAA TCTGACCGAT
ATTAACGCCG CGATTGCCCT GACACAGTTA GTCAAATTAG AGCACCTCAA CACCCGTCGG
CGCGAAATTG CCCAGCAATA TCAGCAAGCA CTGGCAGCTC TCCCCTTTCA GCCATTAAGC
CTTCCCGCCT GGCCGCACGT TCACGCCTGG CATCTGTTTA TTATTCGTGT CGATGAACAA
CGTTGTGGTA TCAGTCGCGA TGCGTTGATG GAAGCGTTAA AAGAAAGAGG CATTGGTACC
GGGTTACATT TCCGCGCCGC TCACACACAA AAATATTATC GCGAGCGTTT TCCCACGCTG
TCGTTACCGA ATACCGAATG GAATAGCGAA CGCATCTGTT CTTTGCCGCT GTTCCCGGAT
ATGACTACCG CCGATGCCGA CCATGTCATC ACAGCCCTTC AGCAACTCGC AGGACAATAA
|
|---|
| Protein sequence | MSEFLPFSRP AMGVEELAAV KEVLESGWIT TGPKNQALEQ AFCQLTGNQH AIAVSSATAG
MHITLMALKI GKGDEVITPS LTWVSTLNMI SLLGATPVMV DVDRDTLMVT PEAIESAITP
RTKAIIPVHY AGAPADIDAI RAIGERYGIA VIEDAAHAVG TYYKGRHIGA KGTAIFSFHA
IKNITCAEGG LIVTDNENLA RQLRMLKFHG LGVDAYDRQT WGRAPQAEVL TPGYKYNLTD
INAAIALTQL VKLEHLNTRR REIAQQYQQA LAALPFQPLS LPAWPHVHAW HLFIIRVDEQ
RCGISRDALM EALKERGIGT GLHFRAAHTQ KYYRERFPTL SLPNTEWNSE RICSLPLFPD
MTTADADHVI TALQQLAGQ
|
|---|
| |