Gene EcHS_A2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2022 
Symbol 
ID5593748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2021579 
End bp2022628 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content52% 
IMG OID640921167 
Productputative flagellin 
Protein accessionYP_001458712 
Protein GI157161394 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAG TCATTAATAC CAACAGCCTC TCGCTGATCA CTCAGAACAA CATCAACAAA 
AACCAGTCTG CGCTGTCGAC TTCTATCGAG CGCCTCTCTT CTGGTCTGCG TATTAACAGC
GCTAAAGATG ACGCCGCGGG CCAGGCGATT GCTAACCGCT TTACTTCTAA CATCAAAGGT
CTGACTCAGG CCGCACGTAA CGCCAACGAC GGTATTTCTC TGGCGCAGAC GGCTGAAGGC
GCGCTGTCAG AGATTAACAA CAACTTGCAG CGTATTCGTG AACTGACCGT TCAGGCCTCT
ACCGGCACGA ACTCTGATTC CGACCTGTCT TCTATTCAGG ACGAAATCAA ATCCCGTCTT
GATGAAATTG ACCGTGTATC TGGTCAGACC CAGTTCAACG GTGTGAACGT GCTGTCGAAA
AACGATTCGA TGAAGATTCA GATTGGTGCC AATGATAACC AGACGATCAG CATTGGCTTG
CAACAAATCG ACAGTACCAC TTTGAATCTG AAAGGATTTA CCGTGTCCGG CATGGCGGAT
TTCAGCGCGG CGAAACTGAC GGCTGCTGAT GGTACAGCAA TTGCTGCTGC GGATGTCAAG
GATGCTGGGG GTAAACAAGT CAATTTACTG TCTTACACTG ACACCGCGTC TAACAGTACT
AAATATGCGG TCGTTGATTC TGCAACCGGT AAATACATGG AAGCCACTGT AGCCATTACC
GGTACGGCGG CGGCGGTAAC TGTTGGTGCA GCGGAAGTGG CGGGAGCCGC TACAGCCGAT
CCGTTAAAAG CACTGGATGC CGCAATCGCT AAAGTCGACA AATTCCGCTC CTCCCTCGGT
GCCGTTCAAA ACCGTCTGGA TTCTGCGGTC ACCAACCTGA ACAACACCAC CACCAACCTG
TCTGAAGCGC AGTCCCGTAT TCAGGACGCC GACTATGCGA CCGAAGTGTC CAACATGTCG
AAAGCGCAGA TTATCCAGCA GGCGGGCAAC TCCGTGCTGT CTAAAGCCAA CCAGGTACCG
CAGCAAGTTC TGTCTCTGTT ACAAGGCTAA
 
Protein sequence
MAQVINTNSL SLITQNNINK NQSALSTSIE RLSSGLRINS AKDDAAGQAI ANRFTSNIKG 
LTQAARNAND GISLAQTAEG ALSEINNNLQ RIRELTVQAS TGTNSDSDLS SIQDEIKSRL
DEIDRVSGQT QFNGVNVLSK NDSMKIQIGA NDNQTISIGL QQIDSTTLNL KGFTVSGMAD
FSAAKLTAAD GTAIAAADVK DAGGKQVNLL SYTDTASNST KYAVVDSATG KYMEATVAIT
GTAAAVTVGA AEVAGAATAD PLKALDAAIA KVDKFRSSLG AVQNRLDSAV TNLNNTTTNL
SEAQSRIQDA DYATEVSNMS KAQIIQQAGN SVLSKANQVP QQVLSLLQG