| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1889 |
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| Symbol | |
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| ID | 5592421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 1901225 |
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| End bp | 1902835 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640921031 |
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| Product | putative transporter |
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| Protein accession | YP_001458583 |
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| Protein GI | 157161265 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGCA ATGTTAAGAA AAAAGATGTG CCGCTGATAA GCATCAGCCT GGTGGCCATT
CTTTTCATCG CAGCTGCATT AAGCCTTTTC CCACAACAAT CGGCCGACGC GGCCAACGCA
ATATACACTT TTGTTACTCG TACGTTAGGT TCCGCCGTAC AGGTATTGGT TTTGCTGGCA
ATGGGACTGG TGATTTATTT AGCCACCAGT AAATACGGCA ATATTCGTCT TGGCGAAGGA
AAACCGGAAT ACAGCACGCT CTCCTGGCTG TTTATGTTTA TTTGTGCCGG TTTAGGTTCT
TCTACGCTTT ATTGGGGGGT TGCTGAATGG GCCTATTATT ATCAAACACC TGGATTAAAT
ATCGCACCGC GTTCACAACA GGCACTCGAA TTTAGCGTTC CCTACTCTTT CTTCCACTGG
GGCATCAGCG CCTGGGCAAC TTATACACTG GCCTCATTAA TCATGGCTTA TCACTTTCAT
GTGCGGAAAA ACAAAGGTCT GAGCCTTTCC GGCATTATTG CTGCTATTAC CGGCGTTCGC
CCGCAAGGCC CATGGGGAAA ACTGGTCGAT TTGATGTTCC TGATCGCCAC TGTCGGCGCA
CTGACCATTT CCCTTGTTGT TACCGCAGCA ACCTTTACCC GTGGGCTTTC CGCGCTGACC
GGTTTACCCG ATAACTTCAC CGTGCAGGCA TTTGTGATCC TGCTTTCCGG CGGCATTTTT
TGCCTAAGCT CGTGGATTGG TATCAACAAC GGTTTGCAAC GTCTGAGCAA AATGGTTGGC
TGGGGCGCGT TCCTGCTGCC ATTACTGGTG CTGATTGTCG GCCCAACCGA ATTTATTACC
AACAGCATCA TCAATGCCAT CGGCCTGACC ACGCAAAACT TCCTGCAAAT GAGCTTATTC
ACCGATCCGC TTGGCGATGG TTCATTTACC CGCAACTGGA CCGTTTTCTA CTGGCTGTGG
TGGATCTCAT ACACCCCTGG CGTAGCAATG TTTGTCACCC GCGTTTCCCG CGGTCGTAAG
ATTAAAGAAG TTATCTGGGG ACTGATCCTC GGCAGCACCG TCGGTTGCTG GTTCTTCTTT
GGCGTAATGG AAAGCTATGC CATTCATCAG TTTATCAATG GCGTAATCAA CGTCCCACAG
GTGCTGGAAA CACTGGGCGG CGAAACAGCT GTACAGCAAG TTCTGATGTC GTTGCCAGCC
GGTAAATTGT TCCTCGCCGC ATACCTGGGC GTGATGATTA TTTTCCTTGC CTCGCATATG
GATGCAGTGG CCTACACCAT GGCGGCGACC AGTACGCGTA ATCTCCAGGA AGGTGACGAT
CCTGACCGTG GGCTGCGTCT TTTCTGGTGC GTGGTGATCA CTCTGATCCC GCTTTCCATC
TTGTTTACCG GTGCTTCGCT GGAAACGATG AAAACCACCG TCGTGCTCAC AGCCCTTCCC
TTCCTCGTCA TTTTACTGGT GAAAGCCGGC GGGTTTATTC GCTGGCTGAA ACAGGATTAC
GCCGACATTC CGGCTCATCA AGTTGAACAT TATCTCCCGC AGACACCGGT TGAAGCCCTG
GAAAAAACGC CAGTGCTCCC TGCGGGAACC GTATTCAAAG GCGACAACTG A
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| Protein sequence | MMSNVKKKDV PLISISLVAI LFIAAALSLF PQQSADAANA IYTFVTRTLG SAVQVLVLLA
MGLVIYLATS KYGNIRLGEG KPEYSTLSWL FMFICAGLGS STLYWGVAEW AYYYQTPGLN
IAPRSQQALE FSVPYSFFHW GISAWATYTL ASLIMAYHFH VRKNKGLSLS GIIAAITGVR
PQGPWGKLVD LMFLIATVGA LTISLVVTAA TFTRGLSALT GLPDNFTVQA FVILLSGGIF
CLSSWIGINN GLQRLSKMVG WGAFLLPLLV LIVGPTEFIT NSIINAIGLT TQNFLQMSLF
TDPLGDGSFT RNWTVFYWLW WISYTPGVAM FVTRVSRGRK IKEVIWGLIL GSTVGCWFFF
GVMESYAIHQ FINGVINVPQ VLETLGGETA VQQVLMSLPA GKLFLAAYLG VMIIFLASHM
DAVAYTMAAT STRNLQEGDD PDRGLRLFWC VVITLIPLSI LFTGASLETM KTTVVLTALP
FLVILLVKAG GFIRWLKQDY ADIPAHQVEH YLPQTPVEAL EKTPVLPAGT VFKGDN
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