Gene EcHS_A1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1886 
Symbol 
ID5590900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1898098 
End bp1898736 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content45% 
IMG OID640921028 
Productleucine export protein LeuE 
Protein accessionYP_001458580 
Protein GI157161262 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCGCTG AATACGGGGT TCTGAATTAC TGGACCTATC TGGTTGGGGC CATTTTTATT 
GTGTTGGTGC CAGGGCCAAA TACCCTGTTT GTACTCAAAA ATAGCGTCAG TAGCGGTATG
AAAGGCGGTT ATCTTGCGGC CTGCGGTGTA TTTATTGGCG ATGCGGTATT GATGTTTCTG
GCATGGGCTG GAGTGGCGAC ATTAATTAAG ACCACCCCGA TATTATTCAA CATTGTACGT
TATCTTGGTG CGTTTTATTT GCTCTATCTG GGGAGTAAAA TTCTTTACGC GACCCTGAAG
GGTAAAAATA GCGAGGCCAA ATCCGATGAG CCCCAATACG GTGCTATTTT TAAACGCGCG
TTAATTTTGA GCCTGACTAA TCCGAAAGCC ATTTTGTTCT ATGTGTCGTT TTTCGTACAG
TTTATCGATG TTAATGCCCC ACATACGGGA ATTTCATTCT TTATTCTGGC GGCGACGCTG
GAACTGGTGA GTTTCTGCTA TTTGAGCTTC CTGATTATAT CTGGTGCTTT TGTCACGCAG
TACATACGTA CCAAAAAGAA ACTGGCTAAA GTTGGCAACT CACTGATTGG TTTGATGTTC
GTGGGTTTCG CTGCCCGACT GGCGACGCTG CAATCCTGA
 
Protein sequence
MFAEYGVLNY WTYLVGAIFI VLVPGPNTLF VLKNSVSSGM KGGYLAACGV FIGDAVLMFL 
AWAGVATLIK TTPILFNIVR YLGAFYLLYL GSKILYATLK GKNSEAKSDE PQYGAIFKRA
LILSLTNPKA ILFYVSFFVQ FIDVNAPHTG ISFFILAATL ELVSFCYLSF LIISGAFVTQ
YIRTKKKLAK VGNSLIGLMF VGFAARLATL QS