Gene EcHS_A1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1704 
SymbolrnfB 
ID5595514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1728301 
End bp1728879 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content55% 
IMG OID640920852 
Productelectron transport complex protein RnfB 
Protein accessionYP_001458408 
Protein GI157161090 
COG category[C] Energy production and conversion 
COG ID[COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 
TIGRFAM ID[TIGR01944] electron transport complex, RnfABCDGE type, B subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0578538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCTA TCTGGATTGC CGTTGCCGCC GTGAGCCTGC TGGGCCTGGC GTTTGGCGCC 
ATTCTGGGTT ATGCCTCCCG CCGTTTTGCG GTGGAAGACG ATCCGGTCGT TGAGAAAATT
GACGAAATCT TACCGCAGAG CCAGTGTGGT CAGTGCGGTT ATCCCGGCTG TCGCCCCTAC
GCGGAAGCCA TCAGCTGTAA CGGTGAAAAA ATCAACCGTT GCGCCCCAGG TGGCGAAGCT
GTGATGCTAA AAATTGCCGA GTTGCTTAAT GTCGAGCCGC AGCCGCTGGA TGGCGAAGCG
CAAGAGATAA CGCCTGCGCG GATGGTGGCG GTTATTGATG AAAATAACTG TATTGGCTGC
ACTAAATGTA TTCAGGCGTG TCCGGTAGAC GCCATCGTTG GCGCTACCCG TGCCATGCAT
ACGGTAATGA GTGATCTCTG TACGGGCTGC AATTTATGTG TTGATCCGTG CCCGACGCAC
TGCATCTCGT TGCAACCGGT CGCAGAAACA CCTGACTCCT GGAAATGGGA TCTGAACACC
ATTCCCGTGC GTATCATTCC CGTGGAACAC CATGCTTAA
 
Protein sequence
MNAIWIAVAA VSLLGLAFGA ILGYASRRFA VEDDPVVEKI DEILPQSQCG QCGYPGCRPY 
AEAISCNGEK INRCAPGGEA VMLKIAELLN VEPQPLDGEA QEITPARMVA VIDENNCIGC
TKCIQACPVD AIVGATRAMH TVMSDLCTGC NLCVDPCPTH CISLQPVAET PDSWKWDLNT
IPVRIIPVEH HA