Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1704 |
Symbol | rnfB |
ID | 5595514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 1728301 |
End bp | 1728879 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640920852 |
Product | electron transport complex protein RnfB |
Protein accession | YP_001458408 |
Protein GI | 157161090 |
COG category | [C] Energy production and conversion |
COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.0578538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCTA TCTGGATTGC CGTTGCCGCC GTGAGCCTGC TGGGCCTGGC GTTTGGCGCC ATTCTGGGTT ATGCCTCCCG CCGTTTTGCG GTGGAAGACG ATCCGGTCGT TGAGAAAATT GACGAAATCT TACCGCAGAG CCAGTGTGGT CAGTGCGGTT ATCCCGGCTG TCGCCCCTAC GCGGAAGCCA TCAGCTGTAA CGGTGAAAAA ATCAACCGTT GCGCCCCAGG TGGCGAAGCT GTGATGCTAA AAATTGCCGA GTTGCTTAAT GTCGAGCCGC AGCCGCTGGA TGGCGAAGCG CAAGAGATAA CGCCTGCGCG GATGGTGGCG GTTATTGATG AAAATAACTG TATTGGCTGC ACTAAATGTA TTCAGGCGTG TCCGGTAGAC GCCATCGTTG GCGCTACCCG TGCCATGCAT ACGGTAATGA GTGATCTCTG TACGGGCTGC AATTTATGTG TTGATCCGTG CCCGACGCAC TGCATCTCGT TGCAACCGGT CGCAGAAACA CCTGACTCCT GGAAATGGGA TCTGAACACC ATTCCCGTGC GTATCATTCC CGTGGAACAC CATGCTTAA
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Protein sequence | MNAIWIAVAA VSLLGLAFGA ILGYASRRFA VEDDPVVEKI DEILPQSQCG QCGYPGCRPY AEAISCNGEK INRCAPGGEA VMLKIAELLN VEPQPLDGEA QEITPARMVA VIDENNCIGC TKCIQACPVD AIVGATRAMH TVMSDLCTGC NLCVDPCPTH CISLQPVAET PDSWKWDLNT IPVRIIPVEH HA
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