Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1683 |
Symbol | rstA |
ID | 5592576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 1704293 |
End bp | 1705012 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640920831 |
Product | DNA-binding transcriptional regulator RstA |
Protein accession | YP_001458387 |
Protein GI | 157161069 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.160047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACTA TCGTATTTGT GGAAGATGAT GCGGAAGTCG GTTCACTGAT TGCCGCGTAC CTGGCAAAAC ATGATATGCA GGTTACCGTA GAGCCGCGCG GCGACCAGGC CGAAGAAACC ATTTTGCGAG AAAATCCGGA TTTGGTGTTA CTCGACATCA TGCTACCAGG CAAAGACGGC ATGACCATTT GTCGTGATTT ACGCGCAAAG TGGTCTGGAC CGATTGTTCT TCTAACCTCT CTCGATAGCG ATATGAACCA CATCCTGGCA CTGGAAATGG GTGCCTGCGA CTATATTCTC AAAACGACGC CCCCTGCTGT TTTGCTAGCG CGTTTACGTT TGCATTTGCG TCAGAATGAG CAAGCCACAC TGACCAAAGG TCTTCAGGAA ACGTCTCTGA CTCCCTACAA AGCCCTGCAT TTCGGCACGT TGACCATCGA TCCCATCAAC CGCGTAGTCA CCCTGGCTAA CACTGAAATC TCGCTCTCGA CAGCTGATTT CGAATTATTG TGGGAATTAG CTACCCATGC CGGGCAAATC ATGGACCGCG ATGCATTGCT GAAAAATTTA CGCGGCGTCA GTTATGACGG ACTGGATCGT AGCGTGGACG TGGCTATTTC GCGGTTAAGA AAAAAACTAC TCGATAACGC CGCAGAACCT TATCGCATTA AAACCGTGCG TAACAAAGGC TATCTTTTTG CGCCTCATGC ATGGGAATAA
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Protein sequence | MNTIVFVEDD AEVGSLIAAY LAKHDMQVTV EPRGDQAEET ILRENPDLVL LDIMLPGKDG MTICRDLRAK WSGPIVLLTS LDSDMNHILA LEMGACDYIL KTTPPAVLLA RLRLHLRQNE QATLTKGLQE TSLTPYKALH FGTLTIDPIN RVVTLANTEI SLSTADFELL WELATHAGQI MDRDALLKNL RGVSYDGLDR SVDVAISRLR KKLLDNAAEP YRIKTVRNKG YLFAPHAWE
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