Gene EcHS_A1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1682 
Symbol 
ID5592665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1703829 
End bp1704164 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content47% 
IMG OID640920830 
Producthypothetical protein 
Protein accessionYP_001458386 
Protein GI157161068 
COG category[R] General function prediction only 
COG ID[COG3136] Uncharacterized membrane protein required for alginate biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value0.415334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCTGG TAATCAAAGC CGCGCTCGGT GCGCTGGTAG TGCTGTTGAT TGGTGTTTTA 
GCAAAAACGA AAAATTATTA TATCGCCGGG CTGATTCCAC TTTTCCCGAC CTTTGCGCTT
ATCGCGCATT ATATTGTTGC CAGCGAACGC GGCATTGAAG CCTTACGCGC AACCATCATT
TTTAGTATGT GGTCGATTAT TCCCTATTTT GTTTACCTGG TGTCGCTGTG GTATTTCACC
GGAATGATGC GCTTGCCCGC CGCTTTTGTT GGTTCTGTTG CGTGTTGGGG GATAAGCGCA
TGGGTGTTGA TTATATGCTG GATAAAGCTG CATTAA
 
Protein sequence
MGLVIKAALG ALVVLLIGVL AKTKNYYIAG LIPLFPTFAL IAHYIVASER GIEALRATII 
FSMWSIIPYF VYLVSLWYFT GMMRLPAAFV GSVACWGISA WVLIICWIKL H