| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1660 |
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| Symbol | ynfE |
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| ID | 5594468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 1680204 |
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| End bp | 1682630 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640920808 |
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| Product | anaerobic dimethyl sulfoxide reductase, A subunit YnfE |
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| Protein accession | YP_001458364 |
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| Protein GI | 157161046 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAAAA ATGAACGAAT GGTGGGCATC AGCCGCAGAA CACTCGTTAA ATCTACCGCG
ATAGGTTCTC TGGCGCTGGC TGCAGGCGGT TTTTCTTTAC CGTTCACCCT ACGCAGTGCA
GCGGCAGCGG TACAACAGGC CAGCGAGAAA GTGGTCTGGG GTGCCTGTTC CGTCAACTGT
GGTAGCCGCT GTGCACTTCG TCTACATGTT AAAGATAATG AAGTGATCTG GGTGGAAACT
GACAACACCG GCAACGACGA GTATGGCAAT CATCAAGTAC GCGCCTGTTT GCGCGGTCGC
TCCATCCGCC GGCGTATTAA TCATCCCGAT CGCTTGAATT ACCCAATGAA ACGCGTGGGT
AAACGCGGTG AAGGCAAATT CGAACGGATT AGCTGGGATG AAGCCCTGGA TACTATCGCC
AGTAGTCTGA AAAAAACCGT CGAACAATAT GGCAATGAGG CTGTATATAT TCAGTACTCT
TCGGGGATTG TTGGCGGCAA TATGACCCGC TCTTCGCCAT CAGCCTCGGC GGTCAAACGC
CTGATGAACT GCTACGGCGG TTCACTCAAC CAGTATGGCT CCTACAGCAC TGCGCAAATT
TCCTGTGCCA TGCCCTACAC CTACGGCAGT AATGATGGCA ACAGCACCAC GGATATTGAA
AACAGCAAGC TGGTCGTGAT GTTTGGTAAC AACCCGGCAG AAACCCGCAT GAGCGGCGGT
GGCATCACTT ATCTTCTTGA AAAAGCGCGC GAGAAATCGA ACGCCAAAAT GATTGTTATC
GATCCGCGAT ATACCGATAC GGCTGCTGGT CGTGAAGATG AATGGCTTCC TATTCGCCCG
GGCACCGATG CCGCGCTGGT TGCGGGTATT GCCTGGGTAT TGATTAACGA AAATCTCGTT
GATCAACCTT TTCTCGATAA ATACTGCGTC GGCTATGACG AAAAAACCTT ACCCGCAGAT
GCACCCAAAA ATGGTCACTA TAAAGCCTAT ATTCTTGGTG AAGGTGACGA TAAAACAGCG
AAAACGCCGC AGTGGGCTTC GCAAATTACC GGTATCCCGG TGGACCGTAT CATCAAACTG
GCGCGTGAAA TTGGCACAGC AAAACCCGCT TATACCTGCC AGGGCTGGGG GCCACAACGC
CAGGCAAACG GCGAGCTGAC CGCACGCGCT ATTGCTATGT TGCCTATTCT GACGGGCAAT
GTCGGCATCA GCGGCGGAAA TAGTGGCGCG CGTGAATCGA CCTATACCAT TACCATAGAG
CGCCTGCCGG TGCTGGATAA TCCGGTCAAA ACGTCAATTT CCTGCTTCAG CTGGACAGAT
GCTATCGATC ATGGCCCCAA AATGACGGCA ATCCGCGACG GCGTCAGGGG CAAAGATAAA
CTGGATGTGC CCATTAAGTT CATCTGGAAC TTCGCGGGAA ATACCCTCGT TAATCAGCAT
TCTGACATCA ACAAAACGCA TGAAATTCTG CAGGACGAAT CGAAATGCGA AATGATTGTG
GTCATCGAAA ACTTTATGAC CTCATCGGCA AAATATGCCG ACATTCTGCT GCCAGACCTG
ATGACCGTTG AGCAGGAAGA TATTATTCCT AACGACTACG CCGGTAACAT GGGATATCTC
ATTTTCCTCC AGCCTGTCAC CAGCGAAAAA TTCGAACGCA AACCGATTTA CTGGATCCTG
AGTGAAGTCG CGAAACGTCT TGGACCTGAC GTCTATCAAA AGTTCACTGA AGGTCGCACG
CAGGAACAAT GGTTACAACA TCTGTACGCC AAAATGCTTG CCAAAGATCC GGCGTTACCG
TCTTACGACG AACTGAAAAA AATGGGTATC TATAAGCGTA AAGATCCCAA TGGTCATTTT
GTCGCCTACA AAGCATTTCG TGACGACCCC GAGGCAAATC CACTTAAAAC ACCTTCCGGT
AAGATTGAAA TTTATTCCAG CAAGCTGGCG GAAATTGCCC GTACCTGGGA ACTGGAAAAA
GATGAAGTGA TAAGCCCACT GCCAGTTTAT GCCTCTACCT TTGAAGGCTG GGACTCCCCT
GAACGTAGAA CCTTCCCACT GCAACTGTTT GGTTTCCATT ACAAATCCCG TACTCACTCG
ACCTACGGCA ACATTGATGT CCTGAAAGCA GCCTGCCGTC AGGAGGTGTG GATCAACCCT
ATAGATGCGC AGAAACGTGG GATTGCCAAC GGCGATATGG TGCGGGTGTT TAACCATCGT
GGCGAAGTTC GGCTACCAGC CAAAGTGACA CCACGTATTC TCCCTGGAGT TAGCGCTATG
GGCCAGGGAG CCTGGCACGA GGCCAATATA TCTGGCGATA AAATCGACCA TGGCGGCTGT
GTGAATACGC TAACCACTCT GCGCCCTTCA CCACTGGCGA AGGGAAACCC GCAGCACACT
AATCTGGTCG AGATCGAAAA AATATAA
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| Protein sequence | MSKNERMVGI SRRTLVKSTA IGSLALAAGG FSLPFTLRSA AAAVQQASEK VVWGACSVNC
GSRCALRLHV KDNEVIWVET DNTGNDEYGN HQVRACLRGR SIRRRINHPD RLNYPMKRVG
KRGEGKFERI SWDEALDTIA SSLKKTVEQY GNEAVYIQYS SGIVGGNMTR SSPSASAVKR
LMNCYGGSLN QYGSYSTAQI SCAMPYTYGS NDGNSTTDIE NSKLVVMFGN NPAETRMSGG
GITYLLEKAR EKSNAKMIVI DPRYTDTAAG REDEWLPIRP GTDAALVAGI AWVLINENLV
DQPFLDKYCV GYDEKTLPAD APKNGHYKAY ILGEGDDKTA KTPQWASQIT GIPVDRIIKL
AREIGTAKPA YTCQGWGPQR QANGELTARA IAMLPILTGN VGISGGNSGA RESTYTITIE
RLPVLDNPVK TSISCFSWTD AIDHGPKMTA IRDGVRGKDK LDVPIKFIWN FAGNTLVNQH
SDINKTHEIL QDESKCEMIV VIENFMTSSA KYADILLPDL MTVEQEDIIP NDYAGNMGYL
IFLQPVTSEK FERKPIYWIL SEVAKRLGPD VYQKFTEGRT QEQWLQHLYA KMLAKDPALP
SYDELKKMGI YKRKDPNGHF VAYKAFRDDP EANPLKTPSG KIEIYSSKLA EIARTWELEK
DEVISPLPVY ASTFEGWDSP ERRTFPLQLF GFHYKSRTHS TYGNIDVLKA ACRQEVWINP
IDAQKRGIAN GDMVRVFNHR GEVRLPAKVT PRILPGVSAM GQGAWHEANI SGDKIDHGGC
VNTLTTLRPS PLAKGNPQHT NLVEIEKI
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