Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1645 |
Symbol | |
ID | 5593690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 1669439 |
End bp | 1669990 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640920793 |
Product | hypothetical protein |
Protein accession | YP_001458349 |
Protein GI | 157161031 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000000000000957166 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTCAAG ACTATGAACT GGTTGTGAAA GGAGTTCGCA ATTTTGAGAA TAAAGTGGCG GTAACTGTAG CCTTACGGGA CAAAAAACAC TTTGACGGTG AAATTTTTGA CCTGGACATC TCGCTGGACC GTGTTGAAGG TGCCGCGCTG GAGTTTTATG AGGCAGCAGC CAGAAGGAGC ATCAGACAGG TCTTCCTGGA TGTTGCTGCC GGGTTATGTG AAGGGGATGA GCAGTCGCCG GAAAAGCGCC CCATAATTTT AGAGGCGCAG AATGTGTGGA TAACCTACAA AGGAAAGCTA CCGGGAAGAA TTACTGGTTC TCTGAAGACG CCACCGACGG CATTGCGGTC AGAAAAAGAT GATATTGAAT CGCCCATTGA AAAACTGGAG GGCAGCGTCG CTGATCTGAA TAAAAAATTG TCGGTGCTGA TTCCTTCTGA AGATGAAAAA AAACGCCGCG ATGAGCAGTT TGCGGCGTTT TACGATTATT GCATTGAAGT TACTCGCAGG AATTTTGTGA AGATTTTTGA GGAGGGTAAA TCTCTTCAGT AA
|
Protein sequence | MTQDYELVVK GVRNFENKVA VTVALRDKKH FDGEIFDLDI SLDRVEGAAL EFYEAAARRS IRQVFLDVAA GLCEGDEQSP EKRPIILEAQ NVWITYKGKL PGRITGSLKT PPTALRSEKD DIESPIEKLE GSVADLNKKL SVLIPSEDEK KRRDEQFAAF YDYCIEVTRR NFVKIFEEGK SLQ
|
| |