Gene EcHS_A1621 details

Gene Information

• Locus tag: EcHS_A1621
• ID: 5591846
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 1642563
• End bp: 1643282
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640920769
• Product: GntR family transcriptional regulator
• Protein accession: YP_001458325
• Protein GI: 157161007
• COG category: [K] Transcription
• COG ID: [COG2188] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 0.00823964
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATTTTTC AAAAGATTGC CCGCTTACTT AAATCTGAGA TCAATGGCTA TTCATGGCAC 
GTTGGTGATT TGTTGCCGTC AGAAGCTGAA CTCGCAGTTC GTTATAATGT TTCGCGTAAT 
ACCCTGCGTA AGGCATTATC CTTGCTGGAA GGCGAAGGAA TTATTCACAG AAAGCATGGT 
TCAGGAACAT ACATTCAAAA AAAGAATTTT GTTGCACACA TTGATCACAT GAACAGCTTC 
AGTGAAATTG CGCATAAAAG CGGCAAAGAG GCAGGGAGTC AGATTATGAA ATTTGAAGTG 
CAGGATGCTT CACCCACTAT TGCAACTGAG CTGAATTTAG TGCCCGGTGA GCAGGTTTAT 
TACATAAAGA GACTGCGATT CATTGAGGAT AATGCGGCAC AATTAGAAGA AACGTGGATG 
TCAGTGGCAC GTTTTCCTGA TTTAACCGTA TCACATATGC AAAAATCCAA ATTTTCGTAT 
ATTGAGAACG AATGCGGGAT CAAAATCATT GGCACCTATG AAACTTTCTC CCCTACTTTT 
CCTACCCCAG AAATCGCCAG TATTTTACGG ATCAGCCCAC GGGATCCCAT ACTTAAAATT 
CAGACCCAGG CTGTGGACAG TAACTCTATT CCGCTGGATT ATTCGTTACT TTACAGCAAT 
ATTATCGAGT TCCAGGTAAA GTACTTTTTC CGCGATAAAA GCAGACGCAC AGAGTGCTGA 

 

Protein sequence

MIFQKIARLL KSEINGYSWH VGDLLPSEAE LAVRYNVSRN TLRKALSLLE GEGIIHRKHG 
SGTYIQKKNF VAHIDHMNSF SEIAHKSGKE AGSQIMKFEV QDASPTIATE LNLVPGEQVY 
YIKRLRFIED NAAQLEETWM SVARFPDLTV SHMQKSKFSY IENECGIKII GTYETFSPTF 
PTPEIASILR ISPRDPILKI QTQAVDSNSI PLDYSLLYSN IIEFQVKYFF RDKSRRTEC