Gene EcHS_A1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1602 
Symbol 
ID5591390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1624930 
End bp1625895 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content48% 
IMG OID640920754 
Producthypothetical protein 
Protein accessionYP_001458310 
Protein GI157160992 
COG category[S] Function unknown 
COG ID[COG3781] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.738962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGTAA TCACGTTTAA TAGGGCGACT TTTTCACGCC TGAAGATAAC CATGATTGTT 
CGTCCACAAC AACACTGGCT GCGCCGTATT TTTGTCTGGC ACGGCTCAGT ATTATCCAAG
ATATCATCGC GCTTACTACT CAATTTTCTC TTTTCTATCG CTGTTATTTT CATGCTGCCC
TGGTACACGC ATCTGGGCAT CAAATTCACC CTCGCACCGT TCAGCATTCT CGGTGTCGCC
ATCGCCATTT TTCTTGGTTT TCGTAATAAT GCCGGGTACG CCCGTTACGT TGAAGCGCGA
AAACTTTGGG GGCAGTTGAT GATTGCCTCA CGGTCGTTAC TGCGCGAGGT AAAAACGACA
TTGCCGGATT CGGCAAGTGT AAGGGAGTTT GCCCGGTTGC AAATCGCCTT CGCCCACTGT
TTACGCATGA CATTACGCAA ACAGCCACAG GCGGAAGTGC TGGCTCATTA TCTCAAGACT
GAAGATCTTC AGCCTGTACT GGCTTCGAAC TCTCCAGCTA ACCGTATCTT GTTAATAATG
GGGGAGTGGT TGGCGGTTCA GCGCCGCAAT GGGCAGCTTT CAGATATCCT GTTTATTAGC
CTCAACGATC GGCTTAATGA TATTTCAGCG GTTCTGGCAG GCTGTGAGCG CATTGCCTAC
ACGCCAATTC CCTTTGCCTA CACCCTGATT TTGCATCGTA CCGTTTATCT GTTTTGTATC
ATGCTGCCGT TCGCGCTGGT CGTGGACCTG CATTACATGA CGCCTTTTAT CTCTGTGCTG
ATTTCCTACA CTTTTATTTC GCTGGATTGT CTGGCGGAAG AACTGGAAGA TCCGTTCGGT
ACTGAAAACA ATGATTTACC ACTGGATGCC ATCTGCAACG CTATTGAAAT TGACCTGTTA
CAGATGAACG ATGAAGCCGA AATTCCAGCA AAAATTCTTC CCGATCGTCA TTACCAGCTG
ACGTGA
 
Protein sequence
MIVITFNRAT FSRLKITMIV RPQQHWLRRI FVWHGSVLSK ISSRLLLNFL FSIAVIFMLP 
WYTHLGIKFT LAPFSILGVA IAIFLGFRNN AGYARYVEAR KLWGQLMIAS RSLLREVKTT
LPDSASVREF ARLQIAFAHC LRMTLRKQPQ AEVLAHYLKT EDLQPVLASN SPANRILLIM
GEWLAVQRRN GQLSDILFIS LNDRLNDISA VLAGCERIAY TPIPFAYTLI LHRTVYLFCI
MLPFALVVDL HYMTPFISVL ISYTFISLDC LAEELEDPFG TENNDLPLDA ICNAIEIDLL
QMNDEAEIPA KILPDRHYQL T