| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1578 |
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| Symbol | gadB |
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| ID | 5594808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 1587470 |
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| End bp | 1588870 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640920731 |
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| Product | glutamate decarboxylase GadB |
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| Protein accession | YP_001458287 |
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| Protein GI | 157160969 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGA AGCAAGTAAC GGATTTAAGG TCGGAACTAC TCGATTCACG TTTTGGTGCG
AAGTCTATTT CCACTATCGC AGAATCAAAA CGTTTTCCGC TGCACGAAAT GCGCGACGAT
GTCGCATTTC AGATTATCAA TGACGAATTA TATCTTGATG GCAACGCTCG TCAGAACCTG
GCCACTTTCT GCCAGACCTG GGACGACGAC AATGTCCACA AGTTGATGGA TTTATCCATT
AACAAAAACT GGATCGACAA AGAAGAATAT CCGCAATCCG CAGCCATCGA CCTGCGTTGC
GTAAATATGG TTGCCGATCT GTGGCATGCG CCTGCGCCGA AAAATGGTCA GGCCGTTGGC
ACCAACACCA TTGGTTCTTC CGAGGCCTGT ATGCTCGGCG GGATGGCGAT GAAATGGCGT
TGGCGCAAGC GTATGGAAGC TGCAGGCAAA CCAACGGATA AACCGAACCT GGTGTGCGGT
CCGGTACAAA TCTGCTGGCA TAAATTCGCC CGCTACTGGG ATGTGGAGCT GCGTGAGATC
CCTATGCGCC CCGGTCAGTT GTTTATGGAC CCGAAACGCA TGATTGAAGC CTGCGACGAA
AACACCATCG GCGTGGTGCC GACTTTCGGC GTGACCTACA CCGGTAACTA TGAGTTCCCG
CAGCCGCTGC ACGATGCGCT GGATAAATTC CAGGCCGACA CCGGTATCGA CATCGACATG
CACATCGACG CTGCCAGCGG TGGCTTCCTG GCACCGTTCG TCGCCCCGGA TATCGTCTGG
GACTTCCGCC TGCCGCGTGT GAAATCGATC AGTGCTTCAG GCCATAAATT CGGTCTGGCT
CCGCTGGGCT GCGGCTGGGT TATCTGGCGT GACGAAGAAG CGCTGCCGCA GGAACTGGTG
TTCAACGTTG ACTACCTGGG TGGTCAGATT GGTACTTTTG CCATCAACTT CTCCCGCCCG
GCGGGTCAGG TAATTGCACA GTACTATGAA TTCCTGCGCC TCGGTCGTGA AGGCTATACC
AAAGTACAGA ACGCCTCTTA CCAGGTTGCC GCTTATCTGG CGGATGAAAT CGCCAAACTG
GGGCCGTATG AGTTCATCTG TACCGGTCGC CCGGACGAAG GCATCCCGGC GGTTTGCTTC
AAACTGAAAG AGGGTGAAGA TCCGGGATAC ACCCTGTACG ACCTCTCTGA ACGTCTGCGT
CTGCGCGGCT GGCAGGTTCC GGCCTTCACT CTCGGCGGTG AAGCCACCGA CATCGTGGTG
ATGCGCATTA TGTGCCGTCG CGGCTTCGAA ATGGACTTTG CTGAACTGTT GCTGGAAGAC
TACAAAGCCT CCCTGAAATA TCTCAGCGAT CACCCGAAAC TGCAGGGTAT TGCCCAACAG
AACAGCTTTA AACATACCTG A
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| Protein sequence | MDKKQVTDLR SELLDSRFGA KSISTIAESK RFPLHEMRDD VAFQIINDEL YLDGNARQNL
ATFCQTWDDD NVHKLMDLSI NKNWIDKEEY PQSAAIDLRC VNMVADLWHA PAPKNGQAVG
TNTIGSSEAC MLGGMAMKWR WRKRMEAAGK PTDKPNLVCG PVQICWHKFA RYWDVELREI
PMRPGQLFMD PKRMIEACDE NTIGVVPTFG VTYTGNYEFP QPLHDALDKF QADTGIDIDM
HIDAASGGFL APFVAPDIVW DFRLPRVKSI SASGHKFGLA PLGCGWVIWR DEEALPQELV
FNVDYLGGQI GTFAINFSRP AGQVIAQYYE FLRLGREGYT KVQNASYQVA AYLADEIAKL
GPYEFICTGR PDEGIPAVCF KLKEGEDPGY TLYDLSERLR LRGWQVPAFT LGGEATDIVV
MRIMCRRGFE MDFAELLLED YKASLKYLSD HPKLQGIAQQ NSFKHT
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