Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1570 |
Symbol | yddQ |
ID | 5591955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 1575826 |
End bp | 1576722 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640920723 |
Product | ATP-dependent peptide transporter membrane subunit |
Protein accession | YP_001458279 |
Protein GI | 157160961 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCTAA GCGAGGAAAC GTCCGCCGTA CGCCCACAAA AACAAACGCG ATTTAACGGT GCAAAACTGG TATGGATGCT GAAAGGCAGT CCGCTCACCG TGACCGGCGC AGTCATCATT GTATTAATGC TACTGATGAT GATTTTTTCA CCGTGGCTGG CGACGCATGA TCCCAACGCC ATTGATTTAA CCACCCGCCT TTTGCCGCCT TCTGCGGCGC ACTGGTTTGG CACCGATGAA GTGGGACGCG ATCTGTTTAG CCGCGTACTG GTCGGCAGTC AGCAATCAAT TCTCGCCGGA TTAGTCGTAG TTGCCATTGC GGGTATGATT GGTTCGCTAC TCGGATGTCT ATCCGGTGTG CTTGGCGGAC GCGCAGACGC CATCATCATG CGCATCATGG ACATTATGCT GTCGATTCCT TCGTTGGTAC TGACAATGGC ACTGGCTGCC GCTCTCGGGC CGAGTTTGTT TAACGCCATG CTGGCGATTG CTATAGTGCG AATTCCGTTT TATGTGCGCC TGGCGCGGGG GCAAGCATTA GTTGTACGCC AGTATACCTA TGTTCAGGCG GCGAAAACCT TTGGCGCGTC GCGTTGGCAT CTGATCAGCT GGCATATTTT ACGTAATTCC CTGCCGCCGC TGATCGTGCA GGCATCGCTG GATATCGGTA GCGCGATTTT AATGGCCGCC ACGTTGGGAT TTATTGGCCT GGGTGCTCAA CAACCGAGTG CTGAATGGGG CGCGATGGTA GCAAATGGTC GCAACTATGT ACTCGATCAG TGGTGGTATT GCGCATTTCC GGGGGCAGCG ATTTTGCTTA CCGCCGTCGG GTTTAATCTC TTTGGTGATG GTATTCGCGA TCTGCTTGAC CCGAAAGCAG GAGGAAAGCA GTCATGA
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Protein sequence | MMLSEETSAV RPQKQTRFNG AKLVWMLKGS PLTVTGAVII VLMLLMMIFS PWLATHDPNA IDLTTRLLPP SAAHWFGTDE VGRDLFSRVL VGSQQSILAG LVVVAIAGMI GSLLGCLSGV LGGRADAIIM RIMDIMLSIP SLVLTMALAA ALGPSLFNAM LAIAIVRIPF YVRLARGQAL VVRQYTYVQA AKTFGASRWH LISWHILRNS LPPLIVQASL DIGSAILMAA TLGFIGLGAQ QPSAEWGAMV ANGRNYVLDQ WWYCAFPGAA ILLTAVGFNL FGDGIRDLLD PKAGGKQS
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