Gene EcHS_A1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1570 
SymbolyddQ 
ID5591955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1575826 
End bp1576722 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content54% 
IMG OID640920723 
ProductATP-dependent peptide transporter membrane subunit 
Protein accessionYP_001458279 
Protein GI157160961 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCTAA GCGAGGAAAC GTCCGCCGTA CGCCCACAAA AACAAACGCG ATTTAACGGT 
GCAAAACTGG TATGGATGCT GAAAGGCAGT CCGCTCACCG TGACCGGCGC AGTCATCATT
GTATTAATGC TACTGATGAT GATTTTTTCA CCGTGGCTGG CGACGCATGA TCCCAACGCC
ATTGATTTAA CCACCCGCCT TTTGCCGCCT TCTGCGGCGC ACTGGTTTGG CACCGATGAA
GTGGGACGCG ATCTGTTTAG CCGCGTACTG GTCGGCAGTC AGCAATCAAT TCTCGCCGGA
TTAGTCGTAG TTGCCATTGC GGGTATGATT GGTTCGCTAC TCGGATGTCT ATCCGGTGTG
CTTGGCGGAC GCGCAGACGC CATCATCATG CGCATCATGG ACATTATGCT GTCGATTCCT
TCGTTGGTAC TGACAATGGC ACTGGCTGCC GCTCTCGGGC CGAGTTTGTT TAACGCCATG
CTGGCGATTG CTATAGTGCG AATTCCGTTT TATGTGCGCC TGGCGCGGGG GCAAGCATTA
GTTGTACGCC AGTATACCTA TGTTCAGGCG GCGAAAACCT TTGGCGCGTC GCGTTGGCAT
CTGATCAGCT GGCATATTTT ACGTAATTCC CTGCCGCCGC TGATCGTGCA GGCATCGCTG
GATATCGGTA GCGCGATTTT AATGGCCGCC ACGTTGGGAT TTATTGGCCT GGGTGCTCAA
CAACCGAGTG CTGAATGGGG CGCGATGGTA GCAAATGGTC GCAACTATGT ACTCGATCAG
TGGTGGTATT GCGCATTTCC GGGGGCAGCG ATTTTGCTTA CCGCCGTCGG GTTTAATCTC
TTTGGTGATG GTATTCGCGA TCTGCTTGAC CCGAAAGCAG GAGGAAAGCA GTCATGA
 
Protein sequence
MMLSEETSAV RPQKQTRFNG AKLVWMLKGS PLTVTGAVII VLMLLMMIFS PWLATHDPNA 
IDLTTRLLPP SAAHWFGTDE VGRDLFSRVL VGSQQSILAG LVVVAIAGMI GSLLGCLSGV
LGGRADAIIM RIMDIMLSIP SLVLTMALAA ALGPSLFNAM LAIAIVRIPF YVRLARGQAL
VVRQYTYVQA AKTFGASRWH LISWHILRNS LPPLIVQASL DIGSAILMAA TLGFIGLGAQ
QPSAEWGAMV ANGRNYVLDQ WWYCAFPGAA ILLTAVGFNL FGDGIRDLLD PKAGGKQS