Gene EcHS_A1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1539 
Symbol 
ID5592268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1544277 
End bp1545338 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content50% 
IMG OID640920694 
Producthypothetical protein 
Protein accessionYP_001458250 
Protein GI157160932 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02276] 40-residue YVTN family beta-propeller repeat 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTAC GTCATCTGTT TTCATCGCGC CTGCGTGGTT CATTACTGTT AGGTTCATTG 
CTTGTTGCTT CATCATTCAG TACGCAGGCC GCAGAAGAAA TGCTGCGTAA AGCGGTAGGT
AAAGGTGCCT ACGAAATGGC TTATAGCCAG CAAGAAAACG CACTGTGGCT CGCCACTTCG
CAAAGCCGCA AACTGGATAA AGGTGGCGTG GTTTATCGTC TTGATCCGGT CACTCTGGAA
GTGACGCAGG CGATCCATAA CGATCTCAAG CCGTATGGTG CCACCATCAA TAACACGACT
CAGACGTTGT GGTTTGGTAA CACCGTAAAC AGCGCGGTCA CGGCGATAGA TGCCAAAACG
GGCGAAGTGA AAGGCCGTCT GGTGCTGGAT GATCGTAAGC GCACGGAAGA GGTGCGCCCG
CTGCAACCGC GTGAGCTGGT AGCTGATGAT GCCACGAACA CCGTTTACAT CAGTGGTATT
GGTAAAGAGA GCGTGATTTG GGTCGTTGAT GGCGAGAATA TCAAACTGAA AACCGCCATC
CAGAACACCG GTAAAATGAG TACCGGTCTG GCGCTGGATA GCAAAGGCAA ACGTCTTTAC
ACCACTAACG CTGACGGCGA ATTGATTACC ATCGACACCG CCGACAATAA AATCCTCAGC
CGTAAAAAGC TGCTGGATGA CGGCAAAGAG CACTTCTTTA TCAACATTAG CCTTGATATC
GCCAGGCAGC GTGCATTTAT CACCGATTCT AAAGCGGCAG AAGTGTTAGT GGTCGATACC
CGTAATGGCA ATATTCTGGC GAAGGTTGCG GCACCGGAAT CACTGGCTGT GCTGTTTAAC
CCAGCGCGTA ATGAAGCCTA CGTAACGCAT CGTCAGGCAG GTAAAGTCAG TGTGATTGAC
GCGAAAAGCT ATAAAGTGGT GAAAACGTTC GATACGCCGA CTCATCCGAA CAGCCTGGCG
CTGTCTGCCG ATGGCAAAAC GCTGTATGTC AGTGTAAAAC AAAAATCCAC TAAACAGCAG
GAAGCTACCC AGCCGGACGA TGTGATTCGT ATTGCGCTGT AA
 
Protein sequence
MHLRHLFSSR LRGSLLLGSL LVASSFSTQA AEEMLRKAVG KGAYEMAYSQ QENALWLATS 
QSRKLDKGGV VYRLDPVTLE VTQAIHNDLK PYGATINNTT QTLWFGNTVN SAVTAIDAKT
GEVKGRLVLD DRKRTEEVRP LQPRELVADD ATNTVYISGI GKESVIWVVD GENIKLKTAI
QNTGKMSTGL ALDSKGKRLY TTNADGELIT IDTADNKILS RKKLLDDGKE HFFINISLDI
ARQRAFITDS KAAEVLVVDT RNGNILAKVA APESLAVLFN PARNEAYVTH RQAGKVSVID
AKSYKVVKTF DTPTHPNSLA LSADGKTLYV SVKQKSTKQQ EATQPDDVIR IAL