| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1464 |
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| Symbol | ydbK |
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| ID | 5591699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 1460452 |
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| End bp | 1463976 |
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| Gene Length | 3525 bp |
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| Protein Length | 1174 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640920621 |
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| Product | pyruvate-flavodoxin oxidoreductase |
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| Protein accession | YP_001458177 |
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| Protein GI | 157160859 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
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| TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.104129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTACTA TTGACGGTAA TGGCGCGGTT GCTTCGGTGG CGTTTCGCAC CAGTGAAGTT
ATCGCCATCT ACCCTATTAC CCCCAGTTCC ACGATGGCAG AACAGGCTGA TGCCTGGGCC
GGAAACGGCT TGAAGAACGT TTGGGGAGAC ACACCACGCG TGGTTGAAAT GCAGTCGGAA
GCGGGTGCTA TCGCTACCGT GCATGGCGCT TTGCAGACGG GTGCCCTTTC AACATCGTTT
ACGTCATCGC AGGGTTTGCT GCTGATGATC CCGACGCTGT ACAAACTGGC AGGCGAACTC
ACACCGTTTG TCCTGCATGT AGCGGCACGT ACCGTTGCCA CACATGCACT CTCTATTTTT
GGCGATCATT CCGACGTCAT GGCGGTGCGC CAGACGGGTT GCGCGATGTT GTGTGCGGCA
AACGTCCAGG AAGCGCAAGA CTTTGCTCTC ATTTCGCACA TCGCGACGCT GAAAAGCCGC
GTGCCATTTA TTCATTTCTT TGATGGTTTC CGCACGTCCC ACGAAATCAA TAAAATTGTC
CCGCTGGCCG ATGACACTAT TCTTGATCTC ATGCCGCAGG CCGAAATTGA TGCTCATCGC
GCCCGGGCGC TCAACCCGGA ACATCCGGTG ATCCGCGGTA CGTCCGCCAA TCCTGACACT
TATTTCCAGT CTCGCGAAGC CACCAACCCC TGGTACAACG CGGTCTATGA CCATGTTGAA
CAGGCGATGA ATGATTTCGC TGCCGCGACA GGTCGTCAGT ATCAGCCGTT TGAGTATTAC
GGGCATCCGC AAGCGGAACG GGTGATTATC CTGATGGGCT CTGCCATTGG CACCTGTGAA
GAAGTGATTG ATGAATTGCT AACCCGTGGC GAAAATGTCG GCGTGCTGAA AGTTCGCCTG
TACCGCCCCT TCTCCGCTAA ACATTTACTG CAAGCTCTGC CGGGATCCGT ACGCAGCGTG
GCGGTACTGG ACAGAACCAA AGAACCCGGT GCCCAGGCAG AACCGCTCTA TCTGGATGTG
ATGACCGCAC TGGCAGAAGC CTTTAATAAT GGCGAGCGCG AAACTCTGCC CCGTGTCATT
GGTGGGCGCT ATGGTCTTTC ATCCAAAGAA TTTGGCCCGG ACTGTGTACT GGCGGTATTT
GCCGAGCTCA ACGCGGCTAA ACCGAAAGCG CGCTTTACGG TTGGTATTTA CGATGATGTG
ACTAATCTGT CACTGCCGTT GCCGGAAAAC ACCCTGCCAA ACTCGGCGAA ACTGGAAGCC
TTGTTTTATG GCCTTGGTAG TGATGGCAGC GTTTCCGCGA CCAAAAACAA TATCAAGATT
ATCGGTAATT CCACGCCGTG GTACGCACAG GGCTATTTTG TTTACGACTC CAAAAAGGCG
GGCGGCCTGA CGGTTTCTCA CCTTCGAGTG AGCGAACAGC CGATTCGTTC CGCTTATCTC
ATTTCCCAGG CTGATTTTGT TGGCTGCCAC CAGTTGCAGT TTATCGATAA ATATCAGATG
GCTGAGCGTT TAAAACCTGG CGGCATTTTC CTGCTCAACA CACCGTACAG CGCAGATGAA
GTGTGGTCGC GCTTGCCGCA AGAAGTTCAG GCCGTGTTAA ACCAAAAAAA AGCGCGCTTC
TATGTGATTA ACGCGGCGAA AATCGCCCGC GAATGTGGCC TGGCGGCCCG TATTAATACC
GTCATGCAGA TGGCTTTTTT CCATCTGACG CAAATTCTGC CTGGCGATAG CGCCCTCGCA
GAATTGCAGG GTGCGATTGC CAAAAGTTAC AGTAGCAAAG GCCAGGATCT GGTGGAACGC
AACTGGCAGG CTCTGGCGCT GGCGCGTGAA TCCGTAGAAG AAGTTCCGTT GCAACCGGTA
AATCCGCACA GCGCCAATCG ACCGCCAGTG GTTTCCGATG CCGCCCCTGA TTTCGTGAAA
ACCGTAACCG CTGCGATGCT CGCCGGGCTT GGTGACGCCC TCCCCGTTTC GGCGCTGCCG
CCAGACGGCA CCTGGCCGAT GGGCACTACG CGCTGGGAAA AACGCAATAT CGCCGAAGAG
ATCCCCATCT GGAAAGAGGA ACTCTGTACC CAATGTAACC ACTGCGTTGC CGCTTGCCCA
CACTCAGCTA TTCGCGCAAA AGTGGTGCCG CCTGAAGCGA TGGAAAACGC CCCTGCCAGC
CTGCATTCGC TGGATGTGAA ATCGCGTGAT ATGCGCGGGC AGAAATATGT CTTGCAGGTG
GCACCGGAAG ATTGCACCGG TTGTAACCTG TGCGTCGAAG TTTGCCCGGC GAAAGACCGT
CAGAATCCAG AGATTAAAGC CATCAATATG ATGTCTCGCC TGGAACATGT CGAAGAAGAG
AAAATCAATT ACGATTTCTT CCTCAACCTG CCAGAAATCG ACCGTAGCAA ACTGGAACGT
ATTGATATTC GTACATCGCA GCTGATTACA CCGCTGTTTG AATATTCAGG TGCTTGCTCC
GGTTGTGGCG AGACGCCGTA TATTAAATTA CTGACTCAGC TCTATGGCGA CCGGATGTTG
ATCGCTAACG CCACTGGCTG TTCTTCAATT TATGGCGGTA ACCTGCCCTC TACACCGTAT
ACCACCGATG CCAACGGTCG TGGGCCGGCA TGGGCGAACT CTCTATTTGA AGATAATGCC
GAATTTGGCC TTGGTTTCCG CCTGACGGTC GATCAACACC GTGTCCGCGT GCTGCGTCTG
CTGGATCAAT TTGCCGATAA AATCCCGGCG GAATTACTGA CGGCGTTGAA ATCAGACGCC
ACGCCAGAGG TTCGTCGTGA ACAGGTTGCA GCTTTACGCC AGCAACTCAA CGATGTTGCC
GAAGCACATG AACTGCTACG TGATGCAGAT GCACTGGTGG AAAAATCAAT CTGGCTGATT
GGTGGTGATG GCTGGGCTTA CGATATCGGC TTTGGCGGTC TGGATCATGT ATTGAGTTTG
ACGGAAAACG TCAACATTCT GGTGCTGGAT ACGCAATGCT ATTCCAACAC CGGTGGTCAG
GCGTCGAAAG CGACACCGCT GGGTGCAGTA ACTAAATTTG GCGAGCACGG CAAACGTAAA
GCGCGTAAAG ATCTTGGCGT CAGTATGATG ATGTACGGTC ATGTTTATGT GGCGCAGATT
TCTCTCGGCG CGCAGCTGAA CCAGACGGTG AAAGCGATTC AGGAAGCGGA AGCGTATCCG
GGGCCATCGC TGATCATTGC TTATAGCCCG TGTGAAGAGC ATGGTTACGA TCTGGCACTC
AGCCACGACC AGATGCGCCA ACTCACAGCT ACCGGCTTCT GGCCGCTATA TCGCTTTGAT
CCGCGTCGTG CCGATGAAGG CAAACTGCCG CTGGCCTTGG ATTCACGCCC GCCGTCAGAA
GCACTGGAAG AAACGTTACT TCACGAGCAA CGTTTCCGTC GGCTGAATTC GCAGCAGCCA
GAAGTGGCAG AACAGTTATG GAAAGATGCT GCAGCTGATT TGCAAAAACG CTATGACTTC
CTGGCACAAA TGGCCGGAAA AGCGGAAAAA AGCAACACCG ATTAA
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| Protein sequence | MITIDGNGAV ASVAFRTSEV IAIYPITPSS TMAEQADAWA GNGLKNVWGD TPRVVEMQSE
AGAIATVHGA LQTGALSTSF TSSQGLLLMI PTLYKLAGEL TPFVLHVAAR TVATHALSIF
GDHSDVMAVR QTGCAMLCAA NVQEAQDFAL ISHIATLKSR VPFIHFFDGF RTSHEINKIV
PLADDTILDL MPQAEIDAHR ARALNPEHPV IRGTSANPDT YFQSREATNP WYNAVYDHVE
QAMNDFAAAT GRQYQPFEYY GHPQAERVII LMGSAIGTCE EVIDELLTRG ENVGVLKVRL
YRPFSAKHLL QALPGSVRSV AVLDRTKEPG AQAEPLYLDV MTALAEAFNN GERETLPRVI
GGRYGLSSKE FGPDCVLAVF AELNAAKPKA RFTVGIYDDV TNLSLPLPEN TLPNSAKLEA
LFYGLGSDGS VSATKNNIKI IGNSTPWYAQ GYFVYDSKKA GGLTVSHLRV SEQPIRSAYL
ISQADFVGCH QLQFIDKYQM AERLKPGGIF LLNTPYSADE VWSRLPQEVQ AVLNQKKARF
YVINAAKIAR ECGLAARINT VMQMAFFHLT QILPGDSALA ELQGAIAKSY SSKGQDLVER
NWQALALARE SVEEVPLQPV NPHSANRPPV VSDAAPDFVK TVTAAMLAGL GDALPVSALP
PDGTWPMGTT RWEKRNIAEE IPIWKEELCT QCNHCVAACP HSAIRAKVVP PEAMENAPAS
LHSLDVKSRD MRGQKYVLQV APEDCTGCNL CVEVCPAKDR QNPEIKAINM MSRLEHVEEE
KINYDFFLNL PEIDRSKLER IDIRTSQLIT PLFEYSGACS GCGETPYIKL LTQLYGDRML
IANATGCSSI YGGNLPSTPY TTDANGRGPA WANSLFEDNA EFGLGFRLTV DQHRVRVLRL
LDQFADKIPA ELLTALKSDA TPEVRREQVA ALRQQLNDVA EAHELLRDAD ALVEKSIWLI
GGDGWAYDIG FGGLDHVLSL TENVNILVLD TQCYSNTGGQ ASKATPLGAV TKFGEHGKRK
ARKDLGVSMM MYGHVYVAQI SLGAQLNQTV KAIQEAEAYP GPSLIIAYSP CEEHGYDLAL
SHDQMRQLTA TGFWPLYRFD PRRADEGKLP LALDSRPPSE ALEETLLHEQ RFRRLNSQQP
EVAEQLWKDA AADLQKRYDF LAQMAGKAEK SNTD
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