Gene EcHS_A1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1413 
SymbolpuuD 
ID5592344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1408573 
End bp1409337 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content53% 
IMG OID640920568 
Productgamma-glutamyl-gamma-aminobutyrate hydrolase 
Protein accessionYP_001458127 
Protein GI157160809 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA TAATGAACAA TCCGGTTATC GGTGTCGTAA TGTGCAGGAA CAGGCTTAAG 
GGTCATGCGA CCCAGACTCT GCAAGAAAAG TACCTGAATG CCATCATCCA CGCAGGCGGC
TTGCCAATTG CGCTACCACA TGCGCTGGCG GAACCGTCGT TACTTGAACA ACTTTTGCCG
AAACTCGATG GCATTTATCT TCCTGGTAGT CCCAGCAATG TGCAGCCGCA CCTATATGGT
GAAAACGGCG ATGAGCCTGA CGCCGATCCC GGGCGTGATC TTCTGAGCAT GGCGATAATT
AATGCCGCAC TCGAAAGGCG CATCCCCATT TTCGCCATCT GCCGGGGTTT ACAAGAACTG
GTGGTGGCAA CCGGTGGTTC GTTGCATCGC AAGCTGTGCG AACAGCCTGA ATTGCTGGAA
CATCGGGAAG ATCCCGAACT GCCGGTGGAA CAGCAATATG CACCGTCGCA TGAAGTTCAG
GTTGAAGAGG GGGGATTACT GTCTGCGTTG TTACCTGAAT GTAGCAACTT TTGGGTAAAC
TCTCTACATG GACAAGGGGC GAAGGTCGTT AGCCCACGGT TGCGTGTTGA AGCTCGCTCG
CCGGATGGCT TAGTTGAGGC GGTTAGCGTC ATCAATCATC CTTTTGCGCT GGGCGTACAG
TGGCACCCGG AATGGAACAG TAGCGAGTAC GCGCTTTCGC GTATATTGTT CGAGGGCTTT
ATCACCGCTT GTCAGCACCA TATCGCTGAA AAACAGCGAC TCTGA
 
Protein sequence
MENIMNNPVI GVVMCRNRLK GHATQTLQEK YLNAIIHAGG LPIALPHALA EPSLLEQLLP 
KLDGIYLPGS PSNVQPHLYG ENGDEPDADP GRDLLSMAII NAALERRIPI FAICRGLQEL
VVATGGSLHR KLCEQPELLE HREDPELPVE QQYAPSHEVQ VEEGGLLSAL LPECSNFWVN
SLHGQGAKVV SPRLRVEARS PDGLVEAVSV INHPFALGVQ WHPEWNSSEY ALSRILFEGF
ITACQHHIAE KQRL