| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1393 |
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| Symbol | pyrF |
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| ID | 5592450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 1389483 |
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| End bp | 1390220 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640920548 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001458107 |
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| Protein GI | 157160789 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 6.93545e-17 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGTTAA CTGCTTCATC TTCTTCCCGC GCTGTTACGA ATTCTCCTGT GGTTGTTGCC
CTTGATTATC ATAATCGTGA TGACGCGCTG TCCTTTGTCG ACAAGATCGA CCCACGCGAT
TGTCGTCTGA AGGTCGGCAA AGAGATGTTT ACATTGTTTG GGCCACAGTT TGTGCGCGAA
CTTCAACAGC GTGGTTTTGA TATCTTTCTT GACCTGAAAT TCCACGATAT TCCTAACACT
GCAGCGCACG CTGTCGCTGC TGCAGCTGAC TTAGGCGTGT GGATGGTGAA TGTTCATGCC
TCTGGTGGGG CGCGTATGAT GACCGCAGCG CGTGAGGCAC TGGTTCCGTT TGGCAAAGAT
GCACCGCTTT TGATTGCTGT GACAGTGTTG ACCAGCATGG AAGCCAGCGA CCTGGTCGAT
CTTGGCATGA CACTGTCACC TGCAGATTAT GCAGAACGTC TGGCGGCACT GACGCAAAAA
TGTGGCCTTG ATGGTGTGGT GTGTTCTGCT CAGGAAGCTG TGCGCTTTAA ACAGGTATTC
GGTCAGGAGT TCAAACTGGT TACGCCGGGC ATTCGTCCGC AGGGGAGTGA AGCTGGTGAC
CAGCGCCGCA TTATGACGCC AGAACAGGCG TTGTCGGCTG GTGTTGATTA TATGGTGATT
GGTCGCCCGG TAACGCAATC GGTAGATCCA GCGCAGACGC TGAAAGCGAT CAACGCCTCT
TTACAGCGGA GTGCATGA
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| Protein sequence | MTLTASSSSR AVTNSPVVVA LDYHNRDDAL SFVDKIDPRD CRLKVGKEMF TLFGPQFVRE
LQQRGFDIFL DLKFHDIPNT AAHAVAAAAD LGVWMVNVHA SGGARMMTAA REALVPFGKD
APLLIAVTVL TSMEASDLVD LGMTLSPADY AERLAALTQK CGLDGVVCSA QEAVRFKQVF
GQEFKLVTPG IRPQGSEAGD QRRIMTPEQA LSAGVDYMVI GRPVTQSVDP AQTLKAINAS
LQRSA
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