| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1381 |
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| Symbol | sohB |
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| ID | 5594982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 1376389 |
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| End bp | 1377438 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640920536 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_001458095 |
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| Protein GI | 157160777 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAATTGT TGTCTGAATA TGGTTTGTTT TTGGCGAAAA TCGTTACCGT TGTGCTAGCG
ATTGCGGCGA TTGCCGCCAT TATTGTCAAT GTTGCTCAAC GTAATAAACG CCAGCGTGGC
GAGTTACGGG TCAACAATCT CAGCGAACAG TATAAGGAGA TGAAAGAAGA ACTGGCCGCG
GCGCTGATGG ACTCACATCA GCAAAAACAG TGGCACAAAG CGCAGAAGAA AAAGCATAAG
CAAGAAGCGA AAGCAGCAAA AGCGAAAGCC AAACTGGGAG AGGTGGCAAC TGACAGTAAA
CCCCGCGTCT GGGTGCTGGA TTTTAAAGGC AGCATGGACG CCCATGAAGT GAACTCGCTA
CGTGAAGAGA TAACGGCTGT ACTCGCAGCA TTCAAACCGC AGGATCAGGT TGTACTACGT
CTGGAAAGCC CTGGTGGCAT GGTGCATGGT TACGGGTTGG CGGCTTCGCA GCTGCAGCGT
CTGCGTGATA AAAACATTCC TTTAACTGTT ACGGTAGACA AAGTCGCTGC CAGCGGCGGT
TACATGATGG CCTGTGTGGC GGACAAAATT GTTTCCGCAC CGTTTGCTAT TGTGGGTTCC
ATTGGGGTGG TGGCGCAAAT GCCCAACTTT AACCGCTTCC TGAAAAGCAA AGATATTGAT
ATCGAACTTC ACACCGCCGG GCAGTATAAG CGTACGCTGA CCTTGCTGGG TGAAAATACC
GAAGAAGGGC GGGAGAAATT CCGCGAAGAG CTGAACGAAA CGCATCAGTT ATTTAAAGAT
TTTGTGAAGC GTATGCGTCC GTCTCTGGAT ATTGAACAGG TGGCAACGGG TGAACACTGG
TACGGACAAC AGGCGGTAGA GAAAGGCCTG GTTGATGAAA TCAACACCAG TGATGAAGTT
ATTCTTAGCC TGATGGAAGG CCGTGAAGTG GTCAATGTAC GCTATATGCA GCGTAAACGA
CTCATTGACC GACTCACCGG CAGCGCGGCA GAGAGCGCCG ATCGATTGTT GTTACGCTGG
TGGCAGCGGG GGCAAAAGCC ATTGATGTAA
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| Protein sequence | MELLSEYGLF LAKIVTVVLA IAAIAAIIVN VAQRNKRQRG ELRVNNLSEQ YKEMKEELAA
ALMDSHQQKQ WHKAQKKKHK QEAKAAKAKA KLGEVATDSK PRVWVLDFKG SMDAHEVNSL
REEITAVLAA FKPQDQVVLR LESPGGMVHG YGLAASQLQR LRDKNIPLTV TVDKVAASGG
YMMACVADKI VSAPFAIVGS IGVVAQMPNF NRFLKSKDID IELHTAGQYK RTLTLLGENT
EEGREKFREE LNETHQLFKD FVKRMRPSLD IEQVATGEHW YGQQAVEKGL VDEINTSDEV
ILSLMEGREV VNVRYMQRKR LIDRLTGSAA ESADRLLLRW WQRGQKPLM
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