Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1378 |
Symbol | rluB |
ID | 5592877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 1373909 |
End bp | 1374784 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640920533 |
Product | 23S rRNA pseudouridylate synthase B |
Protein accession | YP_001458092 |
Protein GI | 157160774 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAA AGCTACAGAA AGTGCTGGCG CGTGCCGGCC ACGGTTCTCG CCGTGAAATC GAATCTATTA TTGAAGCCGG TCGTGTGAGT GTTGATGGCA AAATTGCTAA ACTCGGCGAT CGTGTTGAAG TTACCCCTGG ATTGAAAATC CGTATCGATG GTCACCTGAT TTCGGTACGT GAGTCCGCTG AACAAATTTG TCGCGTTCTG GCCTATTACA AACCGGAAGG TGAGTTGTGT ACCCGTAACG ATCCGGAAGG ACGTCCAACG GTGTTTGACC GTCTGCCAAA ACTGCGTGGC GCACGCTGGA TTGCCGTGGG TCGCTTGGAC GTTAATACCT GTGGTCTGCT GCTGTTCACC ACCGATGGTG AACTGGCAAA CCGTTTAATG CACCCAAGCC GTGAAGTTGA ACGTGAATAT GCCGTGCGTG TATTTGGTCA GGTTGACGAC GCGAAACTGC GTGATTTGAG TCGTGGCGTG CAGTTGGAAG ATGGTCCGGC AGCTTTTAAA ACCATCAAGT TCAGCGGCGG CGAAGGGATC AACCAGTGGT ACAACGTGAC TCTGACCGAA GGCCGTAACC GTGAAGTTCG TCGTCTGTGG GAAGCGGTTG GTGTGCAGGT GAGCCGCCTG ATCCGTGTTC GTTACGGTGA TATCCCACTG CCAAAAGGTC TGCCACGCGG TGGCTGGACG GAGCTGGACC TCGCCCAGAC TAACTATCTG CGCGAACTGG TGGAGCTACC GCCAGAAACC AGCTCTAAAG TCGCTGTAGA AAAAGACCGT CGTCGCATGA AGGCGAATCA GATTCGTCGT GCGGTGAAAC GTCACAGTCA GGTGAGCGGC GGTCGTCGTT CTGGCGGACG TAATAATAAC GGTTAA
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Protein sequence | MSEKLQKVLA RAGHGSRREI ESIIEAGRVS VDGKIAKLGD RVEVTPGLKI RIDGHLISVR ESAEQICRVL AYYKPEGELC TRNDPEGRPT VFDRLPKLRG ARWIAVGRLD VNTCGLLLFT TDGELANRLM HPSREVEREY AVRVFGQVDD AKLRDLSRGV QLEDGPAAFK TIKFSGGEGI NQWYNVTLTE GRNREVRRLW EAVGVQVSRL IRVRYGDIPL PKGLPRGGWT ELDLAQTNYL RELVELPPET SSKVAVEKDR RRMKANQIRR AVKRHSQVSG GRRSGGRNNN G
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