Gene EcHS_A1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1324 
Symbol 
ID5593438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1319187 
End bp1320287 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content49% 
IMG OID640920481 
Productcalcium/sodium:proton antiporter 
Protein accessionYP_001458042 
Protein GI157160724 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.185191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAATG CTCAAGAGGC GGTAAAAACC CGCCACAAGG AGACTTCGCT TATTTTCCCG 
GTTCTGGCGC TGGTAGTGCT GTTCCTGTGG GGAAGCAGCC AGACACTACC AGTGGTCATT
GCCATCAATC TTCTTGCGCT TATTGGTATT TTAAGTAGCG CCTTTAGTGT TGTCCGTCAT
GCGGACGTAT TAGCCCATCG CCTGGGAGAA CCTTACGGTT CGCTTATTCT TAGCCTTTCA
GTGGTTATTC TTGAAGTCAG TTTGATTTCA GCTTTAATGG CAACCGGCGA CGCCGCGCCA
ACGCTAATGC GTGATACGCT CTATTCAATC ATTATGATTG TTACCGGTGG GCTGGTTGGC
TTTTCATTAT TGTTGGGCGG TCGTAAGTTT GCCACCCAAT ATATGAATCT GTTTGGTATC
AAGCAGTATT TAATTGCGCT GTTCCCCCTG GCGATAATCG TACTGGTATT TCCAATGGCT
CTGCCTGCGG CGAATTTTTC AACCGGTCAG GCGTTACTGG TAGCATTAAT TTCTGCGGCA
ATGTATGGCG TATTTTTGCT GATCCAGACC AAAACGCATC AAAGTTTGTT TGTCTACGAG
CACGAAGATG ACAGTGATGA CGACGACCCG CATCACGGTA AACCGTCTGC CCATAGCAGC
GTGTGGCATG CTATCTGGTT GATTATCCAT CTGATTGCCG TTATTGCAGT CACCAAAATG
AATGCCAGCC CGCTGGAGAC ATTGCTCGAC AGCATGAATG CCCCTGTCGC CTTTACTGGC
TTCCTGGTGG CTCTGTTGAT TCTGTCGCCG GAAGGTTTAG GTGCGTTAAA AGCAGTGTTG
AACAACCAGG TCCAGCGCGC GATGAATCTG TTCTTTGGTT CAGTGTTAGC AACCATTTCG
CTTACCGTAC CTGTCGTCAC GCTAATTGCC TTTATGACGG GTAACGAATT ACAGTTTGCA
CTTGGTGCGC CAGAAATGGT GGTGATGGTG GCCTCTTTAG TGCTGTGCCA TATCTCCTTC
TCCACCGGAC GTACTAACGT GCTCAATGGC GCAGCGCATC TGGCACTGTT TGCCGCCTAT
TTGATGACGA TATTTGCCTG A
 
Protein sequence
MSNAQEAVKT RHKETSLIFP VLALVVLFLW GSSQTLPVVI AINLLALIGI LSSAFSVVRH 
ADVLAHRLGE PYGSLILSLS VVILEVSLIS ALMATGDAAP TLMRDTLYSI IMIVTGGLVG
FSLLLGGRKF ATQYMNLFGI KQYLIALFPL AIIVLVFPMA LPAANFSTGQ ALLVALISAA
MYGVFLLIQT KTHQSLFVYE HEDDSDDDDP HHGKPSAHSS VWHAIWLIIH LIAVIAVTKM
NASPLETLLD SMNAPVAFTG FLVALLILSP EGLGALKAVL NNQVQRAMNL FFGSVLATIS
LTVPVVTLIA FMTGNELQFA LGAPEMVVMV ASLVLCHISF STGRTNVLNG AAHLALFAAY
LMTIFA