| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1314 |
|---|
| Symbol | lolB |
|---|
| ID | 5593921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 1311316 |
|---|
| End bp | 1311939 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640920471 |
|---|
| Product | outer membrane lipoprotein LolB |
|---|
| Protein accession | YP_001458032 |
|---|
| Protein GI | 157160714 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000000000000110519 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTGC CCGATTTTCG TCTTATCCGC CTGCTACCGC TGGCTGCTCT TGTGCTCACT
GCCTGTTCCG TTACCACGCC CAAAGGTCCT GGCAAAAGCC CGGATTCGCC ACAATGGCGT
CAGCATCAGC AAGACGTGCG CAATCTTAAT CAGTATCAGA CTCGCGGCGC GTTCGCTTAT
ATTTCTGACC AACAAAAAGT GTACGCCCGC TTTTTCTGGC AGCAAACCGG CCAGGATCGC
TACCGTCTGC TGCTTACTAA CCCATTGGGC AGCACGGAAC TGGAGCTGAA TGCTCAACCG
GGTAACGTGC AGTTAGTCGA CAATAAAGGT CAGCGTTATA CCGCCGATGA CGCCGAAGAG
ATGATTGGCA AATTGACCGG AATGCCAATT CCGCTCAACA GCTTGCGCCA GTGGATTTTA
GGTTTACCGG GTGATGCAAC CGACTACAAA CTGGACGACC AGTACCGCCT GAGCGAAATT
ACCTACAGCC AGAATGGCAA AAACTGGAAG GTTGTTTATG GTGGTTATGA CACCAAAACG
CAACCTGCGA TGCCAGCCAA TATGGAACTC ACCGACGGTG GTCAACGCAT CAAGTTAAAA
ATGGATAACT GGATAGTGAA ATAA
|
|---|
| Protein sequence | MPLPDFRLIR LLPLAALVLT ACSVTTPKGP GKSPDSPQWR QHQQDVRNLN QYQTRGAFAY
ISDQQKVYAR FFWQQTGQDR YRLLLTNPLG STELELNAQP GNVQLVDNKG QRYTADDAEE
MIGKLTGMPI PLNSLRQWIL GLPGDATDYK LDDQYRLSEI TYSQNGKNWK VVYGGYDTKT
QPAMPANMEL TDGGQRIKLK MDNWIVK
|
|---|
| |