| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1291 |
|---|
| Symbol | |
|---|
| ID | 5594109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 1284148 |
|---|
| End bp | 1285680 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640920448 |
|---|
| Product | SpoVR family protein |
|---|
| Protein accession | YP_001458009 |
|---|
| Protein GI | 157160691 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2719] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000000000558794 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGA TCGATTCTAT GAATAAGGAC ACCACACGTT TGAGCGATGG ACCCGACTGG
ACGTTCGACC TGCTGGATGT TTATCTGGCA GAGATAGACC GGGTGGCGAA ACTCTACCGG
CTGGATACCT ACCCGCACCA GATTGAAGTG ATAACCTCAG AACAGATGAT GGATGCCTAC
TCCAGCGTCG GCATGCCAAT TAACTATCCG CACTGGTCAT TCGGTAAAAA GTTTATCGAG
ACTGAACGGC TGTATAAGCA CGGTCAGCAA GGACTGGCCT ATGAAATCGT CATTAACTCT
AACCCGTGTA TCGCTTACCT GATGGAAGAG AACACCATTA CCATGCAAGC GCTGGTGATG
GCTCATGCCT GCTATGGGCA TAACTCTTTC TTTAAAAACA ATTACTTATT CCGTAGCTGG
ACCGACGCCA GTTCGATTGT CGATTATCTG ATTTTTGCCC GTAAATATAT TACCGAGTGC
GAAGAGCGTT ATGGCGTTGA TGAAGTAGAA CGGCTTCTGG ACTCGTGCCA CGCGCTGATG
AACTACGGCG TGGACCGGTA CAAACGCCCG CAAAAAATCT CGCTGCAAGA AGAGAAAGCC
CGGCAGAAAA GTCGCGAAGA GTATCTGCAA AGTCAGGTCA ATATGCTCTG GCGTACCCTG
CCGAAGCGCG AGGAAGAGAA AACGGTTGCT GAAGCGCGCC GCTATCCGTC CGAACCACAA
GAAAACCTGC TCTATTTTAT GGAGAAAAAT GCGCCACTGC TGGAATCATG GCAGCGTGAA
ATCCTGCGTA TTGTGCGTAA GGTGAGCCAG TATTTTTATC CGCAAAAACA GACTCAGGTG
ATGAACGAAG GCTGGGCGAC CTTCTGGCAC TACACCATCC TTAACCATCT GTATGATGAA
GGGAAAGTAA CGGAACGTTT TATGCTGGAG TTTTTGCACA GCCACACCAA TGTGGTCTTC
CAGCCCCCCT ATAACAGCCC GTGGTACAGC GGCATCAACC CGTATGCCCT CGGGTTCGCC
ATGTTCCAGG ATATTAAACG GATTTGTCAG TCGCCAACGG AAGAAGACAA ATACTGGTTC
CCGGATATCG CCGGTTCCGA CTGGCTGGAA ACGCTGCATT TCGCGATGCG TGATTTCAAA
GATGAGAGTT TTATCAGCCA GTTCCTGTCA CCGAAAGTGA TGCGTGATTT CCGCTTCTTC
ACCGTGCTGG ATGACGATCG GCATAATTAT CTGGAGATTT CCGCTATTCA TAATGAAGAA
GGTTATCGGG AGATCCGTAA CCGGTTATCG TCGCAATATA ACTTAAGTAA TCTGGAGCCG
AATATTCAGA TCTGGAACGT GGATTTGCGC GGCGACCGTT CGCTGACGCT GCGTTATATT
CCACATAATC GCGCACCGCT GGATCGGGGG CGCAAAGAAG TCCTGAAGCA TGTGCATCGC
CTGTGGGGAT TTGATGTGAT GCTCGAACAG CAAAACGAAG ACGGCAGCAT CGAGTTGCTG
GAACGTTGCC CGCCAAGAAT GGGAAATCTG TAA
|
|---|
| Protein sequence | MATIDSMNKD TTRLSDGPDW TFDLLDVYLA EIDRVAKLYR LDTYPHQIEV ITSEQMMDAY
SSVGMPINYP HWSFGKKFIE TERLYKHGQQ GLAYEIVINS NPCIAYLMEE NTITMQALVM
AHACYGHNSF FKNNYLFRSW TDASSIVDYL IFARKYITEC EERYGVDEVE RLLDSCHALM
NYGVDRYKRP QKISLQEEKA RQKSREEYLQ SQVNMLWRTL PKREEEKTVA EARRYPSEPQ
ENLLYFMEKN APLLESWQRE ILRIVRKVSQ YFYPQKQTQV MNEGWATFWH YTILNHLYDE
GKVTERFMLE FLHSHTNVVF QPPYNSPWYS GINPYALGFA MFQDIKRICQ SPTEEDKYWF
PDIAGSDWLE TLHFAMRDFK DESFISQFLS PKVMRDFRFF TVLDDDRHNY LEISAIHNEE
GYREIRNRLS SQYNLSNLEP NIQIWNVDLR GDRSLTLRYI PHNRAPLDRG RKEVLKHVHR
LWGFDVMLEQ QNEDGSIELL ERCPPRMGNL
|
|---|
| |