Gene EcHS_A1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1238 
Symbol 
ID5593093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1237798 
End bp1238871 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content49% 
IMG OID640920398 
Producthypothetical protein 
Protein accessionYP_001457960 
Protein GI157160642 
COG category[S] Function unknown 
COG ID[COG4763] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.00200189 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAA AAGAGCTATG GATTAACCAG ATCAAAGGGT TATGTATTTG TCTGGTGGTG 
ATTTATCACT CGGTCATTAC CTTTTATCCG CATCTGACCA CTTTTCAGCA TCCGTTATCG
GAAGTCCTGA GCAAATGCTG GATCTATTTC AATCTTTACC TTGCACCCTT TCGTATGCCG
TTTTTTTTCT TTATTTCCGG CTATTTGATT CGCCGCTATA TCGACAGCGT ACCGTGGGGA
AATTGTCTCG ATAAACGCAT CTGGAGCATC TTTTGGGTGC TGGCGCTTTG GGGCGTGGTG
CAGTGGCTGG CGTTAAGTGC GCTGAACCAG TGGCTGGCAC CTGAGCGCGA TTTAAGCAAT
GCCTCCAATG CCGCTTATGC CGATTCCACC GGTGAGTTCC TGCACGGGAT GATCACCGCC
AGCACCAGCT TGTGGTATCT GTATGCGTTA ATTGTCTATT TCGTGGTATG TAAAATTTTT
AGCCGTCTGG CGCTGCTACT ATTCGCCTTG TTTGTACTGC TGAGTGTGGC GGTTAATTTC
GTTCCCACGC CGTGGTGGGG AATGAACAGT GTGATCCGCA ATTTGCCTTA TTACAGCCTT
GGCGCATGGT TTGGCGCAAC AATAATGACC TGTGTTAAAG AGGTGCCGTT GCGCCGCCAT
CTGCTAATGG CTTCTTTGCT TACCGTTCTG GCGGTCGGTG CCTGGTTGTT TACTATCTCG
CTGCTGTTGT CGCTGGTATC GATTGTGGTG ATCATGAAGC TGTTTTATCA ATACGAGCAA
CGATTCGGTA TGCGCTCCAC CAGCCTGCTG AATGTGATTG GCTCCAACAC CATTGCTATC
TACACCACCC ATCGCATTCT GGTTGAAATA TTCAGCTTAA CTCTGCTTGC GCAAATGAAC
GCAGCACGCT GGTCGCCGCA AGTCGAACTG ACACTCCTGC TGGTTTATCC CTTTGTCAGT
TTGTTCATCT GTACTGTTGC GGGCTTGCTG GTAAGAAAAC TTTCACAGCG TGCATTCAGC
GATCTGTTGT TCTCCCCGCC TTCACTGCCC GCTGCCGTCA GTTACTCCCG CTAA
 
Protein sequence
MKQKELWINQ IKGLCICLVV IYHSVITFYP HLTTFQHPLS EVLSKCWIYF NLYLAPFRMP 
FFFFISGYLI RRYIDSVPWG NCLDKRIWSI FWVLALWGVV QWLALSALNQ WLAPERDLSN
ASNAAYADST GEFLHGMITA STSLWYLYAL IVYFVVCKIF SRLALLLFAL FVLLSVAVNF
VPTPWWGMNS VIRNLPYYSL GAWFGATIMT CVKEVPLRRH LLMASLLTVL AVGAWLFTIS
LLLSLVSIVV IMKLFYQYEQ RFGMRSTSLL NVIGSNTIAI YTTHRILVEI FSLTLLAQMN
AARWSPQVEL TLLLVYPFVS LFICTVAGLL VRKLSQRAFS DLLFSPPSLP AAVSYSR