Gene EcHS_A1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1236 
Symbol 
ID5592970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1233118 
End bp1234080 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content53% 
IMG OID640920396 
ProductLysM/ErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001457958 
Protein GI157160640 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATGATCA AAACGCGTTT TTCTCGCTGG CTAACGTTTT TTACGTTCGC CGCTGCCGTG 
GCGCTGGCGC TACCGGCAAA AGCCAACACC TGGCCGCTGC CGCCAGCGGG CAGTCGTCTG
GTTGGCGAAA ACAAATTTCA TGTGGTGGAA AATGACGGTG GTTCTCTGGA AGCCATCGCC
AAAAAATATA ACGTCGGCTT TCTCGCTCTG TTACAGGCTA ACCCTGGCGT TGATCCTTAC
GTACCGCGCG CGGGTAGCGT GTTAACGATC CCGTTGCAAA CCCTACTTCC AGATGCGCCG
CGCGAAGGCA TTGTGATCAA TATTGCGGAG CTGCGTCTCT ATTACTACCC GCCGGGTAAA
AATTCGGTAA CCGTGTATCC AATAGGTATT GGTCAGTTAG GTGGTGACAC GCTGACACCG
ACAATGGTGA CCACCGTTTC AGACAAACGT GCAAACCCAA CCTGGACGCC AACGGCAAAC
ATCCGCGCCC GTTATAAAGC ACAGGGAATT GAGTTGCCTG CGGTAGTGCC GGCTGGACCG
GATAACCCAA TGGGCCATCA TGCGATTCGT CTGGCGGCCT ATGGCGGCGT TTATTTGCTT
CACGGTACGA ACGCCGATTT CGGCATTGGC ATGCGGGTAA GTTCTGGCTG TATTCGTCTG
CGGGATGACG ATATCAAAAC ACTCTTTAGC CAGGTCACCC CAGGCACCAA AGTGAATATC
ATCAACACTC CGATAAAAGT CTCTGCCGAA CCAAACGGTG CGCGTCTGGT TGAAGTACAT
CAGCCGCTGT CAGAGAAGAT TGATGACGAT CCGCAGCTGC TGCCAATTAC GCTGAATAGC
GCAATGCAAT CATTTAAAGA TGCAGCACAA ACTGACGCTG AAGTGATGCA ACATGTGATG
GATGTCCGTT CCGGGATGCC GGTGGATGTC CGCCGTCATC AAGTGAGCCC ACAAACTCTG
TAA
 
Protein sequence
MMIKTRFSRW LTFFTFAAAV ALALPAKANT WPLPPAGSRL VGENKFHVVE NDGGSLEAIA 
KKYNVGFLAL LQANPGVDPY VPRAGSVLTI PLQTLLPDAP REGIVINIAE LRLYYYPPGK
NSVTVYPIGI GQLGGDTLTP TMVTTVSDKR ANPTWTPTAN IRARYKAQGI ELPAVVPAGP
DNPMGHHAIR LAAYGGVYLL HGTNADFGIG MRVSSGCIRL RDDDIKTLFS QVTPGTKVNI
INTPIKVSAE PNGARLVEVH QPLSEKIDDD PQLLPITLNS AMQSFKDAAQ TDAEVMQHVM
DVRSGMPVDV RRHQVSPQTL