Gene EcHS_A1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1220 
Symboltmk 
ID5592070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand+ 
Start bp1218804 
End bp1219445 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content54% 
IMG OID640920380 
Productthymidylate kinase 
Protein accessionYP_001457942 
Protein GI157160624 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0000000000082141 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGTA AGTATATCGT CATTGAGGGG CTGGAAGGCG CAGGCAAAAC TACCGCGCGT 
AATGTGGTGG TTGAGACGCT CGAGCAACTG GGTATCCGCG ACATGGTTTT CACTCGGGAA 
CCTGGCGGTA CGCAACTTGC CGAAAAGTTA AGAAGCCTGG TGCTGGATAT CAAATCGGTA 
GGCGATGAAG TCATTACCGA TAAAGCCGAA GTTCTGATGT TTTATGCCGC GCGCGTTCAA 
CTGGTAGAAA CAGTCATCAA ACCTGCGCTG GCTAACGGCA CCTGGGTGAT TGGCGATCGC 
CACGATCTCT CCACTCAGGC GTATCAGGGC GGCGGACGTG GTATTGACCA ACATATGCTG 
GCAACACTGC GTGATGCTGT TCTCGGTGAT TTTCGCCCCG ACTTAACGCT CTATCTCGAT 
GTTACCCCGG AAGTTGGCTT AAAACGCGCG CGTGCGCGCG GCGAGCTGGA TCGTATTGAG 
CAAGAGTCTT TCGATTTCTT TAATCGCACC CGCGCCCGCT ATCTGGAACT GGCAGCACAA 
GATAAAAGCA TTCATACCAT TGATGCCACC CAGCCGCTGG AGGCCGTGAT GGATGCAATC 
CGCACTACCG TGACCCACTG GGTGAAGGAG TTGGACGCAT GA
 
Protein sequence
MRSKYIVIEG LEGAGKTTAR NVVVETLEQL GIRDMVFTRE PGGTQLAEKL RSLVLDIKSV 
GDEVITDKAE VLMFYAARVQ LVETVIKPAL ANGTWVIGDR HDLSTQAYQG GGRGIDQHML 
ATLRDAVLGD FRPDLTLYLD VTPEVGLKRA RARGELDRIE QESFDFFNRT RARYLELAAQ 
DKSIHTIDAT QPLEAVMDAI RTTVTHWVKE LDA