Gene EcHS_A1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1180 
Symbol 
ID5595140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1182156 
End bp1182722 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content51% 
IMG OID640920339 
Productnickel-dependent hydrogenase b-type cytochrome subunit 
Protein accessionYP_001457902 
Protein GI157160584 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value0.901054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTCA CAAATACCCC TGAACGCTAT GGTGTTATAT CTGCGGCCTT CCATTGGCTA 
AGCGCAATTA TTGTCTACGG CATGTTTGCT TTAGGTCTGT GGATGGTCAC GCTCAGTTAT
TACGATGGCT GGTATCACAA AGCACCCGAA CTGCATAAAA GCATCGGTAT TTTGTTAATG
ATGGGGCTGG TTATTCGCGT TCTGTGGCGT GTCATATCTC CACCGCCGGG TCCGCTGCCG
AGTTATTCGC CCATGACTCG TCTTGCCGCA AAAGCTGGAC ATCTCGCATT GTACCTATTG
CTGTTCGCAA TCGGCATCAG CGGCTATCTG ATCTCAACTG CCGATGGTAA ACCGATCAGC
GTTTTTGGCT GGTTTGACGT CCCCGCGACC CTTGCCGACG CTGGCGCACA GGCAGACTTT
GCCGGTGCCC TGCATTTTTG GCTCGCGTGG AGCGTCGTAG TACTGTCCGT TATGCACGGA
TTTATGGCCC TGAAGCATCA TTTCATCGAT AAAGACGACA CTCTGAAGCG CATGCTGGGA
AAGTCGTCAT CTGACTATGG AGTATAA
 
Protein sequence
MSFTNTPERY GVISAAFHWL SAIIVYGMFA LGLWMVTLSY YDGWYHKAPE LHKSIGILLM 
MGLVIRVLWR VISPPPGPLP SYSPMTRLAA KAGHLALYLL LFAIGISGYL ISTADGKPIS
VFGWFDVPAT LADAGAQADF AGALHFWLAW SVVVLSVMHG FMALKHHFID KDDTLKRMLG
KSSSDYGV