Gene EcHS_A1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1148 
Symbol 
ID5593232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1158919 
End bp1159905 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content41% 
IMG OID640920307 
Producthypothetical protein 
Protein accessionYP_001457871 
Protein GI157160553 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.00962043 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCTG ATTATTTAAC TTTTATTCGC TTTCAGGATA AACGAAATCT GATATACATT 
TATGCTATTG GACTTATTCT GATAGGCTTT TATTGGAAGA ATGCAGGGTT TATTTTTCCA
TCAGAGGATA TTGGTGTAGT TAGTGGGATT CTGGCTCTGG TGCTGTATAA TTTTATTTTT
GATCTCAAGG CGTACTGGGC TTATAAATGC GTCACGAAGA ATATCGATTT TTCGTGGTTT
AAGAAAAAGC AGAACCACAA AATAGAATTA TTTCTTACAC AACCTCTGGT GGCAGGATTT
CTGTCGTTAA TCATGTTGAG TGCAATGAGT TGGGGGCTAT ACCAGCTTCT ACCCTCGTTA
TATGCGCTGT TCCTGATTTC GTTACTTGGG CCGTTGGTCA TCTTTCTGCT GTTTCGGATG
ATCCGCACCA GTTATGTCAA GCAGGTCGCT ATTTCAGTAG CGAAAAAAGT AAAATATAAA
AGTCTGACTC GCTATGTGCT GCTTTCGGTG TGCATCTCAA CGGTTGTTAA CCTGCTTACT
ATCAGCCCGT TGCGTAACAG TGATTCTTTT GTGACAGAGG GGCAGTGGTT AACGTTTAAA
TCGATAATTG CATTGCTCAT TCTTTGTGGC GTAGTGTTGG CGATTAATCT GTTTTTTCTG
CGCTTCTCCA AGCGGTACGC TTTTCTGGGC AGGCTTTTTT TGCAGGAAAT CGATCTGTTT
TTCTCCAGTG AAAATGCGTT GTCGACCTTT TTTGCCAAGC CGCTTTGGCT TCGGTTATTC
ATATTGCTGG TTATTGAAGT GATGTGGATT ACGCTGGTGT CGGTATTGGC AACGCTTGTG
GAATGGCGGA TTTGGTTTGA AGCCTATTTT TTACTCTGCT ATGTACCGTG CTTAATTTAC
TATTTTTTCT ATTGTCGATT CCTCTGGCAT AACGATTTTA TGATGGCATG TGACATGTAT
TTCCGTTGGG GGCATTTTAA TAAGTGA
 
Protein sequence
MIPDYLTFIR FQDKRNLIYI YAIGLILIGF YWKNAGFIFP SEDIGVVSGI LALVLYNFIF 
DLKAYWAYKC VTKNIDFSWF KKKQNHKIEL FLTQPLVAGF LSLIMLSAMS WGLYQLLPSL
YALFLISLLG PLVIFLLFRM IRTSYVKQVA ISVAKKVKYK SLTRYVLLSV CISTVVNLLT
ISPLRNSDSF VTEGQWLTFK SIIALLILCG VVLAINLFFL RFSKRYAFLG RLFLQEIDLF
FSSENALSTF FAKPLWLRLF ILLVIEVMWI TLVSVLATLV EWRIWFEAYF LLCYVPCLIY
YFFYCRFLWH NDFMMACDMY FRWGHFNK