| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1096 |
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| Symbol | ymcC |
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| ID | 5591440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 1110302 |
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| End bp | 1110946 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640920259 |
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| Product | group 4 capsule (G4C) polysaccharide, lipoprotein YmcC |
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| Protein accession | YP_001457823 |
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| Protein GI | 157160505 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCGCCCTC TTATTTTATC GATTTTCGCA CTATTTCTTG CGGGATGTAC GCACAGCCAG
CAAAGTATGG TCGATACATT TCGCGCCAGC CTTTTCGATA ATCAGGATAT CACCGTAGCG
GATCAGCAGA TCCAGGCGTT GCCTTATTCC ACGATGTATT TACGCCTTAA TGAAGGGCAA
CGAATCTTTG TGGTACTGGG ATATATAGAA CAAGAACAAA GCAAATGGTT ATCCCAGGAT
AACGCCATGC TGGTTACCCA CAATGGACGT CTTTTAAAAA CCGTCAAACT TAATAATAAT
CTGCTGGAAG TGACAAATTC CGGGCAGGAC CCTCTGCGTA ACGCGCTGGC AATAAAAGAT
GGCAGCCGCT GGACGCGCGA TATTCTCTGG AGTGAAGACA ACCATTTTCG CTCTGCGACC
CTGAGTTCTA CTTTTTCCTT TGCTGGATTA GAGACGCTGA ATATTGCGGG TCGCAATGTG
CTGTGTAATG TCTGGCAGGA AGAGGTGACT TCCACGCGGC CAGAAAAACA GTGGCAAAAC
ACATTCTGGG TCGATTCGGC TACTGGCCAG GTTCGTCAAA GTCGGCAAAT GTTAGGCGCA
GGGGTTATTC CCGTAGAAAT GACGTTTCTT AAACCCGCAC CATGA
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| Protein sequence | MRPLILSIFA LFLAGCTHSQ QSMVDTFRAS LFDNQDITVA DQQIQALPYS TMYLRLNEGQ
RIFVVLGYIE QEQSKWLSQD NAMLVTHNGR LLKTVKLNNN LLEVTNSGQD PLRNALAIKD
GSRWTRDILW SEDNHFRSAT LSSTFSFAGL ETLNIAGRNV LCNVWQEEVT STRPEKQWQN
TFWVDSATGQ VRQSRQMLGA GVIPVEMTFL KPAP
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