Gene EcHS_A1068 details

Gene Information

• Locus tag: EcHS_A1068
• ID: 5591812
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 1082752
• End bp: 1083381
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640920233
• Product: TfoX family protein
• Protein accession: YP_001457798
• Protein GI: 157160480
• COG category: [K] Transcription
• COG ID: [COG3070] Regulator of competence-specific genes

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0000000000144107
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGCC TCTCCTATAA GCGGATCTAT AAATCACAAG AATACCTGGC AACGTTGGGC 
ACAATTGAAT ACCGATCATT GTTTGGCAGT TACAGCCTGA CCGTTGACGA CACGGTGTTT 
GCGATGGTTT CTGATGGTGA GTTGTATCTT CGGGCTTGTG AGCAAAGTGC ACAGTACTGT 
GTAAAACATC CGCCTGTCTG GCTGACATAT AAAAAGTGTG GCCGATCCGT TACCCTCAAT 
TACTATCGGG TTGATGAAAG TCTATGGCGA AATCAACTGA AGCTGGTGCG TCTGTCGAAA 
TATTCTCTCG ATGCAGCGCT GAAAGAGAAA AGCACGCGCA ATACCCGGGA AAGACTGAAA 
GATTTGCCCA ATATGTCTTT TCATCTGGAA GCGATTCTCG GGGAGGTGGG GATTAAGGAT 
GTACGGGCGT TACGTATACT TGGGGCAAAA ATGTGTTGGT TGCGACTGCG GCAGCAAAAC 
AGTCTGGTGA CAGAAAAGAT TCTGTTTATG CTTGAAGGTG CCATTATCGG CATTCATGAA 
GCTGCGCTCC CGGTGGCATG CCGCCAGGAG CTTGCAGAAT GGGCTGACTC TCTTACGCCG 
AAACAGGAGT TTCCTGCGGA ACTTGAGTAA 

 

Protein sequence

MKSLSYKRIY KSQEYLATLG TIEYRSLFGS YSLTVDDTVF AMVSDGELYL RACEQSAQYC 
VKHPPVWLTY KKCGRSVTLN YYRVDESLWR NQLKLVRLSK YSLDAALKEK STRNTRERLK 
DLPNMSFHLE AILGEVGIKD VRALRILGAK MCWLRLRQQN SLVTEKILFM LEGAIIGIHE 
AALPVACRQE LAEWADSLTP KQEFPAELE