Gene EcHS_A1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1016 
Symbolcmk 
ID5591805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1021544 
End bp1022227 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content54% 
IMG OID640920185 
Productcytidylate kinase 
Protein accessionYP_001457750 
Protein GI157160432 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0283] Cytidylate kinase 
TIGRFAM ID[TIGR00017] cytidylate kinase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value2.87427e-11 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCAA TTGCCCCGGT TATTACCATT GATGGCCCAA GCGGTGCAGG GAAAGGCACC 
TTGTGTAAGG CTATGGCGGA AGCGTTGCAA TGGCATCTGC TGGACTCGGG TGCAATTTAT
CGCGTACTGG CATTGGCGGC ATTACATCAC CATGTTGATG TTGCGTCGGA AGATGCGCTG
GTACCGCTGG CATCCCATCT GGATGTACGT TTTGTGTCGA CCAATGGCAA TCTGGAAGTG
ATCCTCGAAG GGGAAGATGT CAGCGGCGAA ATTCGTACTC AGGAAGTGGC GAATGCAGCT
TCACAAGTCG CGGCATTCCC ACGCGTTCGT GAAGCATTAT TGCGTCGCCA ACGCGCGTTT
CGCGAATTAC CAGGTCTGAT TGCCGATGGC CGCGACATGG GAACGGTGGT ATTCCCTGAT
GCACCAGTGA AAATTTTCCT TGACGCCTCC TCGGAAGAAC GTGCGCATCG CCGCATGCTA
CAGTTGCAGG AGAAGGGCTT TAGTGTTAAC TTTGAGCGCC TTTTGGCCGA GATCAAAGAA
CGCGACGACC GCGATCGTAA CCGAGCGGTA GCGCCACTGG TTCCGGCAGC CGATGCTTTA
GTGTTGGATT CCACCACCTT AAGCATTGAG CAAGTGATTG AAAAAGCGCT ACAATACGCG
CGCCAGAAAT TGGCTCTCGC ATAA
 
Protein sequence
MTAIAPVITI DGPSGAGKGT LCKAMAEALQ WHLLDSGAIY RVLALAALHH HVDVASEDAL 
VPLASHLDVR FVSTNGNLEV ILEGEDVSGE IRTQEVANAA SQVAAFPRVR EALLRRQRAF
RELPGLIADG RDMGTVVFPD APVKIFLDAS SEERAHRRML QLQEKGFSVN FERLLAEIKE
RDDRDRNRAV APLVPAADAL VLDSTTLSIE QVIEKALQYA RQKLALA