Gene EcHS_A0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0976 
Symbolhcr 
ID5592729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp971417 
End bp972385 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content55% 
IMG OID640920147 
ProductHCP oxidoreductase, NADH-dependent 
Protein accessionYP_001457713 
Protein GI157160395 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATGC CAACGAATCA ATGCCCGTGG CGGATGCAGG TTCATCACAT TACGCAAGAA 
ACGCCGGATG TGTGGACGAT TTCCCTGATT TGCCACGATT ACTACCCATA TCGCGCCGGG
CAATATGCAC TGGTCAGCGT GCGAAACTCA GCGGAAACGC TGCGTGCTTA CACCATTTCC
TCCACGCCAG GCGTGAGTGA ATATATCACC CTGACCGTGC GGCGGATTGA TGACGGTGTC
GGCTCCCAGT GGCTGACGCG CGATGTAAAA CGCGGTGATT ATCTCTGGCT TTCGGACGCG
ATGGGGGAAT TTACCTGCGA CGATAAAGCA GAAGATAAAT TCCTGTTGCT GGCGGCAGGC
TGCGGCGTCA CGCCGATTAT GTCGATGCGT CGCTGGCTGG CGAAGAACTG TCCACAGGCC
GATGTACAGG TGATCTACAA CGTGCGTACG CCGCAGGATG TTATTTTCGC CGATGAGTGG
CGTAACTATC CGGTAACACT GGTGGCAGAA AATAACGTTA CCGAAGGCTT TATCGCTGGT
CGTCTCACTC GCGAACTGCT GGCAGGTGTA CCTGACTTAG CTTCACGTAC CGTGATGACC
TGCGGCCCGG CTCCGTATAT GGATTGGGTA GAGCAGGAAG TGAAAGCGCT CGGCGTGACG
CGTTTCTTTA AAGAGAAATT CTTCACCCCA GTAGCAGAAG CGGCGACCAG CGGTCTGAAA
TTCACCAAAC TGCAACCGGC ACGAGAATTT TACGCCCCGG TTGGCACCAC GCTACTGGAG
GCGCTGGAAA GCAATAACGT TCCGGTTGTC GCTGCCTGCC GTGCGGGTGT TTGCGGCTGC
TGTAAGACAA AAGTGGTTTC CGGTGAATAT ACGGTGAGCA GCACAATGAC GCTGACCGAC
GCCGAAATCG CTGAAGGTTA CGTACTGGCC TGCTCCTGCC ATCCGCAGGG GGATTTGGTT
CTCGCATAA
 
Protein sequence
MTMPTNQCPW RMQVHHITQE TPDVWTISLI CHDYYPYRAG QYALVSVRNS AETLRAYTIS 
STPGVSEYIT LTVRRIDDGV GSQWLTRDVK RGDYLWLSDA MGEFTCDDKA EDKFLLLAAG
CGVTPIMSMR RWLAKNCPQA DVQVIYNVRT PQDVIFADEW RNYPVTLVAE NNVTEGFIAG
RLTRELLAGV PDLASRTVMT CGPAPYMDWV EQEVKALGVT RFFKEKFFTP VAEAATSGLK
FTKLQPAREF YAPVGTTLLE ALESNNVPVV AACRAGVCGC CKTKVVSGEY TVSSTMTLTD
AEIAEGYVLA CSCHPQGDLV LA