Gene EcHS_A0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0880 
SymbolsupH 
ID5595433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp887095 
End bp887910 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content47% 
IMG OID640920052 
Productsugar phosphatase SupH 
Protein accessionYP_001457619 
Protein GI157160301 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTAA AAGTTATCGT CACAGATATG GACGGTACTT TTCTTAACAA CGTCAAAACG 
TACAACCAAC CACGTTTTAT GGCGCAATAT CAGGAACTGA AAAAGCGCGG CATTGAGTTC
GTTGTCGCCA GCGGTAATCA GTATTACCAG CTTATTTCAT TCTTTCCTGA GCTAAAGGAT
GAGATCTCTT TTGTCGCGGA AAACGGCGCA CTGGTTTACG AACATGGCAA GCAACTGTTC
CACGGCGAAC TGACCCGACA TGAATCGCGG ATTGTTATTG GCGAGTTGCT AAAAGATAAG
CAACTCAATT TTGTCGCCTG CGGTCTGCAA AGTGCATATG TCAGCGAAAA CGCCCCCGAA
GCATTCGTCG CACTGATGGC AAAACACTAC CATCGCCTGA AACCTGTAAA AGATTATCAG
GAGATTGACG ACGTACTGTT CAAGTTTTCG CTCAACCTGC CGGATGAACA AATCCCGTTA
GTGATCGACA AACTGCACGT AGCGCTCGAT GGCATTATGA AACCCGTCAC CAGTGGTTTT
GGCTTTATCG ACCTGATTAT TCCCGGTCTA CATAAAGCAA ACGGTATTTC GCGGTTACTG
AAACGCTGGG ATCTGTCACC GCAAAATGTG GTAGCGATTG GCGACAGCGG TAACGATGCG
GAGATGCTGA AAATGGCGCG TTATTCCTTT GCGATGGGCA ATGCTGCGGA AAACATTAAA
CAAATCGCCC GTTACGCTAC CGATGATAAT AATCATGAAG GCGCGCTGAA TGTGATTCAG
GCTGTGCTGG ATAACACATC CCCTTTTAAC AGCTGA
 
Protein sequence
MSVKVIVTDM DGTFLNNVKT YNQPRFMAQY QELKKRGIEF VVASGNQYYQ LISFFPELKD 
EISFVAENGA LVYEHGKQLF HGELTRHESR IVIGELLKDK QLNFVACGLQ SAYVSENAPE
AFVALMAKHY HRLKPVKDYQ EIDDVLFKFS LNLPDEQIPL VIDKLHVALD GIMKPVTSGF
GFIDLIIPGL HKANGISRLL KRWDLSPQNV VAIGDSGNDA EMLKMARYSF AMGNAAENIK
QIARYATDDN NHEGALNVIQ AVLDNTSPFN S