Gene EcHS_A0849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0849 
Symbol 
ID5593335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp855578 
End bp856573 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content57% 
IMG OID640920021 
Producthypothetical protein 
Protein accessionYP_001457588 
Protein GI157160270 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC CTGTCGTGAT CGGATTGGCG GTAGTGGTAC TTGCCGCCGT GGTTGCCGGA 
GGCTACTGGT GGTATCAAAG CCGCCAGGAT AACGGCCTGA CGCTGTATGG CAACGTGGAT
ATTCGTACGG TAAATCTTAG TTTCCGTGTT GGGGGGCGCG TTGAATCGCT GGCGGTGGAC
GAAGGTGATG CTATCAAAGC GGGCCAGGTG CTGGGCGAAC TGGATCACAA GCCGTATGAG
ATTGCCCTGA TGCAGGCGAA AGCGGGTGTT TCGGTGGCAC AGGCGCAGTA TGACCTGATG
CTTGCCGGGT ATCGCGATGA AGAAATCGCT CAGGCCGCCG CAGCGGTGAA ACAGGCGCAA
GCCGCCTATG ATTATGCGCA GAACTTCTAT AACCGCCAGC AAGGGTTGTG GAAAAGCCGC
ACTATTTCGG CAAATGACCT GGAAAATGCC CGCTCCTCGC GCGACCAGGC GCAGGCAACG
CTGAAATCAG CACAGGATAA ATTGCGTCAG TACCGTTCCG GTAACCGTGA ACAGGACATC
GCTCAGGCGA AAGCCAGCCT CGAACAGGCG CAGGCGCAAC TGGCGCAGGC GGAGTTGAAT
TTACAGGACT CAACGTTGAT AGCCCCGTCT GATGGCACGC TGTTAACGCG CGCGGTGGAG
CCAGGCACGG TCCTCAATGA AGGTGGCACG GTGTTTACCG TTTCACTAAC GCGTCCGGTG
TGGGTGCGCG CTTATGTTGA TGAACGTAAT CTTGACCAGG CCCAGCCGGG GCGCAAAGTG
CTGCTTTATA CCGATGGTCG CCCGGACAAG CCGTATCACG GGCAGATTGG TTTCGTTTCG
CCGACTGCTG AATTTACCCC GAAAACCGTC GAAACGCCGG ATCTGCGTAC CGACCTCGTC
TATCGCCTGC GTATTGTGGT GACCGACGCC GATGATGCGT TACGCCAGGG AATGCCAGTG
ACGGTACAAT TCGGTGACGA GGCAGGACAT GAATGA
 
Protein sequence
MKKPVVIGLA VVVLAAVVAG GYWWYQSRQD NGLTLYGNVD IRTVNLSFRV GGRVESLAVD 
EGDAIKAGQV LGELDHKPYE IALMQAKAGV SVAQAQYDLM LAGYRDEEIA QAAAAVKQAQ
AAYDYAQNFY NRQQGLWKSR TISANDLENA RSSRDQAQAT LKSAQDKLRQ YRSGNREQDI
AQAKASLEQA QAQLAQAELN LQDSTLIAPS DGTLLTRAVE PGTVLNEGGT VFTVSLTRPV
WVRAYVDERN LDQAQPGRKV LLYTDGRPDK PYHGQIGFVS PTAEFTPKTV ETPDLRTDLV
YRLRIVVTDA DDALRQGMPV TVQFGDEAGH E