| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0776 |
|---|
| Symbol | sucD |
|---|
| ID | 5595144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 790256 |
|---|
| End bp | 791125 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640919952 |
|---|
| Product | succinyl-CoA synthetase subunit alpha |
|---|
| Protein accession | YP_001457526 |
|---|
| Protein GI | 157160208 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATTT TAATCGATAA AAACACCAAG GTTATCTGCC AGGGCTTTAC CGGTAGCCAG
GGGACTTTCC ACTCAGAACA GGCCATTGCA TACGGCACTA AAATGGTTGG TGGCGTAACT
CCAGGTAAAG GCGGCACTAC CCACCTCGGC CTGCCGGTGT TCAACACCGT GCGTGAAGCT
GTTGCTGCTA CTGGCGCTAC CGCTTCTGTT ATCTACGTAC CAGCACCGTT CTGCAAAGAC
TCCATTCTGG AAGCCATCGA CGCAGGCATC AAACTGATTA TCACCATCAC TGAAGGCATC
CCGACGCTGG ATATGCTGAC TGTGAAAGTG AAACTGGACG AAGCAGGCGT TCGTATGATC
GGCCCGAACT GCCCAGGCGT TATCACTCCG GGTGAATGCA AAATCGGTAT CCAGCCGGGT
CACATTCACA AACCGGGTAA AGTGGGTATC GTTTCCCGTT CCGGTACACT GACCTATGAA
GCGGTTAAAC AGACCACGGA TTACGGTTTC GGTCAGTCGA CCTGTGTCGG TATCGGCGGT
GACCCGATCC CTGGCTCTAA CTTTATCGAC ATTCTCGAAA TGTTCGAAAA AGATCCGCAG
ACCGAAGCGA TCGTGATGAT TGGTGAGATC GGCGGTAGCG CTGAAGAAGA AGCGGCAGCG
TACATCAAAG AGCACGTTAC CAAGCCAGTT GTGGGCTACA TTGCTGGTGT GACTGCGCCG
AAAGGCAAAC GTATGGGCCA CGCGGGTGCC ATCATTGCCG GTGGGAAAGG GACTGCGGAT
GAGAAATTCG CTGCTCTGGA AGCCGCAGGC GTGAAAACCG TTCGCAGCCT GGCGGATATC
GGTGAAGCAC TGAAAACTGT TCTGAAATAA
|
|---|
| Protein sequence | MSILIDKNTK VICQGFTGSQ GTFHSEQAIA YGTKMVGGVT PGKGGTTHLG LPVFNTVREA
VAATGATASV IYVPAPFCKD SILEAIDAGI KLIITITEGI PTLDMLTVKV KLDEAGVRMI
GPNCPGVITP GECKIGIQPG HIHKPGKVGI VSRSGTLTYE AVKQTTDYGF GQSTCVGIGG
DPIPGSNFID ILEMFEKDPQ TEAIVMIGEI GGSAEEEAAA YIKEHVTKPV VGYIAGVTAP
KGKRMGHAGA IIAGGKGTAD EKFAALEAAG VKTVRSLADI GEALKTVLK
|
|---|
| |