| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0728 |
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| Symbol | |
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| ID | 5593046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 738688 |
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| End bp | 740094 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640919905 |
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| Product | OprD family outer membrane porin |
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| Protein accession | YP_001457479 |
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| Protein GI | 157160161 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.00197385 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTACGT TTAGTGGCAA ACGTAGTACG CTGGCGCTGG CTATCGCCGG TGTTACAGCA
ATGTCGGGCT TTATGGCAAT GCCGGAGGCT CGCGCCGAAG GATTCATCGA CGATTCAACC
TTAACCGGCG GTATATATTA CTGGCAGCGT GAACGCGACC GTAAAGATGT TACCGACGGC
GACAAATACA AAACCAACCT TTCTCACTCC ACCTGGAATG CCAACCTCGA TTTTCAGTCT
GGTTATGCTG CTGATATGTT CGGCCTTGAT ATTGCCGCGT TTACGGCGAT TGAAATGGCG
GAAAACGGCG ACAGCTCTCA CCCGAACGAA ATCGCGTTTT CAAAAAGTAA TAAAGCCTAT
GACGAAGACT GGTCCGGCGA CAAAAGCGGT ATAAGCCTGT ATAAAGCAGC GGCCAAATTT
AAATACGGTC CGGTTTGGGC GAGGGCAGGT TATATTCAGC CAACCGGTCA GACGCTGTTA
GCGCCTCACT GGAGCTTTAT GCCGGGTACT TATCAGGGTG CGGAAGCCGG AGCGAATTTT
GATTACGGCG ATGCCGGTGC GTTGAGTTTC TCCTACATGT GGACCAACGA ATACAAAGCG
CCGTGGCATC TGGAAATGGA TGAGTTTTAT CAGAACGATA AAACCACCAA AGTTGATTAT
CTGCACTCCC TTGGGGCGAA ATACGACTTC AAAAATAACT TCGTACTGGA AGCGGCTTTT
GGTCAGGCGG AAGGGTATAT CGATCAATAT TTTGCCAAAG CCAGCTACAA ATTTGATATC
GCCGGTAGCC CGTTAACCAC CAGCTACCAG TTCTACGGTA CCCGCGATAA AGTTGACGAT
CGCAGCGTCA ACGACCTTTA TGACGGCACC GCCTGGCTGC AGGCGTTGAC CTTTGGTTAC
CGGGCGGCTG ACGTAGTGGA TTTGCGCCTC GAAGGCACCT GGGTTAAGGC TGACGGTCAG
CAGGGATACT TCCTGCAACG TATGACTCCA ACCTACGCTT CCTCAAACGG TCGCCTGGAT
ATCTGGTGGG ACAACCGTTC TGACTTCAAC GCCAACGGCG AAAAAGCAGT CTTCTTCGGT
GCGATGTATG ACCTGAAAAA CTGGAATCTT CCAGGCTTCG CCATCGGCGC TTCCTACGTT
TACGCATGGG ATGCTAAACC TGCGACCTGG CAGAGCAATC CGGATGCGTA CTACGACAAA
AACCGGACTA TTGAAGAGTC TGCATACAGC CTGGATGCGG TCTATACCAT TCAGGACGGT
CGCGCCAAAG GCACGATGTT CAAACTGCAC TTCACCGAAT ACGACAACCA CTCCGACATC
CCAAGCTGGG GCGGTGGTTA CGGCAACATC TTCCAGGATG AGCGTGACGT AAAATTTATG
GTAATCGCAC CATTCACCAT CTTCTGA
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| Protein sequence | MRTFSGKRST LALAIAGVTA MSGFMAMPEA RAEGFIDDST LTGGIYYWQR ERDRKDVTDG
DKYKTNLSHS TWNANLDFQS GYAADMFGLD IAAFTAIEMA ENGDSSHPNE IAFSKSNKAY
DEDWSGDKSG ISLYKAAAKF KYGPVWARAG YIQPTGQTLL APHWSFMPGT YQGAEAGANF
DYGDAGALSF SYMWTNEYKA PWHLEMDEFY QNDKTTKVDY LHSLGAKYDF KNNFVLEAAF
GQAEGYIDQY FAKASYKFDI AGSPLTTSYQ FYGTRDKVDD RSVNDLYDGT AWLQALTFGY
RAADVVDLRL EGTWVKADGQ QGYFLQRMTP TYASSNGRLD IWWDNRSDFN ANGEKAVFFG
AMYDLKNWNL PGFAIGASYV YAWDAKPATW QSNPDAYYDK NRTIEESAYS LDAVYTIQDG
RAKGTMFKLH FTEYDNHSDI PSWGGGYGNI FQDERDVKFM VIAPFTIF
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