Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0670 |
Symbol | dpiB |
ID | 5594833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 688316 |
End bp | 689974 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640919851 |
Product | sensor histidine kinase DpiB |
Protein accession | YP_001457433 |
Protein GI | 157160115 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.0246714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCAGC TTAACGAGAA TAAACAGTTT GCATTTTTCC AAAGACTGGC ATTTCCGCTG CGTATCTTTT TGCTGATTCT GGTGTTCTCA ATATTTGTCA TTGCAGCCCT GGCGCAATAT TTTACGGCCA GTTTTGAGGA CTATTTAACG CTTCATGTAC GCGACATGGC AATGAATCAG GCGAAAATTA TTGCCTCCAA TGACAGTGTC ATCTCTGCGG TGAAAACGCG TGACTACAAA CGGCTGGCGA CCATCGCTAA CAAATTACAA AGAGATACCG ATTTTGATTA TGTGGTGATT GGGGACCGGC ACTCGATCCG CCTTTACCAT CCTAATCCGG AGAAAATTGG TTATCCTATG CAGTTCACCA AACAGGGCGC GCTGGAGAAA GGGGAGAGCT ACTTCATTAC CGGGAAAGGG TCAATGGGGA TGGCGATGCG CGCCAAAACG CCAATCTTTG ATGACGATGG AAAAGTCATC GGCGTGGTGT CGATTGGCTA CCTGGTGAGT AAAATCGATA GCTGGCGGGC TGAGTTTTTA TTACCGATGG CAGGTGTGTT TGTCGTGCTG TTAGGGATTC TGATGTTGCT GTCGTGGTTC CTGGCCGCGC ATATCCGTCG GCAGATGATG GGCATGGAGC CAAAGCAAAT CGCACGCGTG GTCCGTCAGC AAGAGGCGCT GTTTAGTTCG GTTTATGAAG GGCTGATTGC GGTGGATCCG CACGGTTACA TTACCGCCAT CAATCGTAAC GCAAGAAAGA TGCTGGGGCT GAGTTCCCCC GGACGGCAAT GGTTGGGTAA AACCATTGCT GAAGTGGTCA GGCCCGCCGA TTTCTTTACC GAACAGATTG ATGAAAAACG TCAGGATGTG GTGGCTAACT TTAACGGTCT GAGCGTTATT GCCAATCGGG AAGCTATTCG TTCAGGTGAT GATTTGCTGG GGGCCATTAT CAGCTTTCGC AGTAAAGACG AAATTTCCAC CCTCAATGCG CAACTGACGC AAATAAAACA ATACGTTGAG AGCCTTCGTA CATTGCGACA CGAGCATCTC AATTGGATGT CGACGCTCAA TGGTCTGTTG CAGATGAAAG AGTATGATCG CGTGCTGGCG ATGGTGCAGG GGGAGTCTCA GGCCCAGCAA CAGCTTATTG ACAGCCTGCG CGAGGCGTTT GCCGATCGCC AGGTGGCGGG GCTGCTTTTT GGTAAAGTGC AGCGCGCCCG GGAACTGGGG CTAAAAATGA TCATTGTCCC CGGTAGCCAG CTTTCGCAAC TGCCGCCAGG ACTGGATAGC ACCGAGTTTG CAGCCATTGT GGGCAATTTA CTTGATAACG CCTTCGAAGC CAGCCTGCGT AGCGATGAAG GAAACAAGAT CGTTGAATTA TTCCTCAGCG ATGAAGGCGA TGATGTGGTG ATTGAAGTCG CCGATCAGGG CTGCGGCGTT CCAGAGTCTC TACGAGACAA AATATTTGAG CAGGGGGTCA GTACGCGTGC TGACGAGCCC GGTGAACATG GCATTGGGTT GTACTTGATT GCCAGCTACG TAACGCGCTG CGGTGGTGTT ATCACTCTCG AAGATAATGA TCCCTGCGGT ACCTTATTTT CAATCTATAT TCCGAAAGTG AAACCTAATG ACAGCTCCAT TAACCCTATT GATCGTTGA
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Protein sequence | MLQLNENKQF AFFQRLAFPL RIFLLILVFS IFVIAALAQY FTASFEDYLT LHVRDMAMNQ AKIIASNDSV ISAVKTRDYK RLATIANKLQ RDTDFDYVVI GDRHSIRLYH PNPEKIGYPM QFTKQGALEK GESYFITGKG SMGMAMRAKT PIFDDDGKVI GVVSIGYLVS KIDSWRAEFL LPMAGVFVVL LGILMLLSWF LAAHIRRQMM GMEPKQIARV VRQQEALFSS VYEGLIAVDP HGYITAINRN ARKMLGLSSP GRQWLGKTIA EVVRPADFFT EQIDEKRQDV VANFNGLSVI ANREAIRSGD DLLGAIISFR SKDEISTLNA QLTQIKQYVE SLRTLRHEHL NWMSTLNGLL QMKEYDRVLA MVQGESQAQQ QLIDSLREAF ADRQVAGLLF GKVQRARELG LKMIIVPGSQ LSQLPPGLDS TEFAAIVGNL LDNAFEASLR SDEGNKIVEL FLSDEGDDVV IEVADQGCGV PESLRDKIFE QGVSTRADEP GEHGIGLYLI ASYVTRCGGV ITLEDNDPCG TLFSIYIPKV KPNDSSINPI DR
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