Gene EcHS_A0619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0619 
SymbolcusC 
ID5594990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp631694 
End bp633067 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content51% 
IMG OID640919800 
Productcopper/silver efflux system outer membrane protein CusC 
Protein accessionYP_001457382 
Protein GI157160064 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00000166732 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCCTT GTAAACTTCT GCCATTTTGT GTGGCCCTTG CGCTAACCGG TTGTTCACTG 
GCACCGGATT ATCAGCGTCC GGCAATGCCC GTGCCGCAGC AGTTCTCACT CAGCCAGAAC
GGCCTGGTTA ACGCAGCAGA TAACTATCAG AACGCGGGCT GGCGCACCTT TTTTGTTGAT
AATCAGGTGA AGACGCTGAT TAGCGAGGCG CTGGTGAATA ATCGGGATTT GCGCATGGCG
ACGCTGAAAG TGCAGGAGGC ACGGGCGCAA TATCGTCTGA CCGATGCCGA CCGCTACCCA
CAGCTCAATG GCGAGGGCAG CGGCAGCTGG AGCGGTAATC TTAAAGGGAA TACCGCCACG
ACACGGGAGT TTTCGACCGG CCTTAACGCC AGCTTTGATC TCGATTTTTT CGGTCGCTTA
AAGAACATGA GCGAAGCCGA GCGCCAAAAT TATTTAGCCA CTGAGGAAGC CCAGCGCGCG
GTGCATATTT TGCTGGTTTC TAATGTCGCG CAAAGTTATT TCAATCAGCA GCTAGCGTAT
GCGCAATTGC AAATAGCCGA AGAAACGCTG CGTAATTATC AGCAGTCATA TGCGTTTGTC
GAAAAACAAC TGTTGACAGG TAGCAGTAAT GTTCTGGCGC TGGAACAGGC TCGCGGGGTG
ATTGAAAGTA CCCGCAGCGA CATCGCTAAA CGTCAGGGGG AACTGGCGCA GGCGAATAAT
GCATTGCAAC TGTTATTGGG AAGCTACGGC AAGCTGCCGC AAGCGCAGAC AGTAAACAGC
GACAGCCTGC AAAGCGTTAA ATTACCGGCG GGATTGTCGT CGCAAATCTT ATTGCAGCGC
CCGGATATTA TGGAAGCTGA ACACGCGTTA ATGGCGGCTA ATGCCAATAT TGGCGCTGCA
CGCGCGGCAT TTTTCCCGTC TATCAGCCTG ACCAGCGGAA TATCAACCGC CAGCAGCGAT
CTGTCGTCAT TATTTAACGC CAGCAGCGGG ATGTGGAATT TTATTCCTAA AATTGATATC
CCCATTTTTA ATGCCGGACG CAACCAGGCC AATCTGGATA TCGCCGAAAT TCGCCAGCAG
CAGTCGGTGG TGAATTATGA ACAGAAAATC CAGAACGCCT TTAAAGAAGT GGCAGATGCG
CTGGCATTAC GTCAAAGCCT GAACGATCAA ATTAGCGCCC AGCAGCGTTA TCTGGCATCG
CTGCAAATTA CTTTGCAACG GGCGCGGGCA TTATATCAGC ACGGCGCAGT AAGTTATCTG
GAAGTGCTGG ATGCCGAGCG TTCTTTATTT GCAACCCGAC AAACTTTACT CGACCTGAAT
TATGCCCGTC AGGTTAACGA AATTTCTTTG TATACCGCAC TTGGTGGCGG TTGA
 
Protein sequence
MSPCKLLPFC VALALTGCSL APDYQRPAMP VPQQFSLSQN GLVNAADNYQ NAGWRTFFVD 
NQVKTLISEA LVNNRDLRMA TLKVQEARAQ YRLTDADRYP QLNGEGSGSW SGNLKGNTAT
TREFSTGLNA SFDLDFFGRL KNMSEAERQN YLATEEAQRA VHILLVSNVA QSYFNQQLAY
AQLQIAEETL RNYQQSYAFV EKQLLTGSSN VLALEQARGV IESTRSDIAK RQGELAQANN
ALQLLLGSYG KLPQAQTVNS DSLQSVKLPA GLSSQILLQR PDIMEAEHAL MAANANIGAA
RAAFFPSISL TSGISTASSD LSSLFNASSG MWNFIPKIDI PIFNAGRNQA NLDIAEIRQQ
QSVVNYEQKI QNAFKEVADA LALRQSLNDQ ISAQQRYLAS LQITLQRARA LYQHGAVSYL
EVLDAERSLF ATRQTLLDLN YARQVNEISL YTALGGG