| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0590 |
|---|
| Symbol | allC |
|---|
| ID | 5592412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 603634 |
|---|
| End bp | 604869 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640919774 |
|---|
| Product | allantoate amidohydrolase |
|---|
| Protein accession | YP_001457357 |
|---|
| Protein GI | 157160039 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family
[TIGR03176] allantoate amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTACAC ATTTTCGTCA AGCCATAGAA GAAGCGCTGC CCTGGCTTTC CTCTTTTGGC
GCTGACCCAA CGGGTGGGAT GACCCGTTTA CTTTATTCGC CGGAATGGCT GGAAACCCAG
CAGCAATTTA AAAAAAGAAT GGCAGCAAGT GGGCTGGAAA CACGTTTCGA TGAAGTAGGG
AATTTATACG GTCGCCTGAA TGGTACCGAA TATCCACAGG AAGTGATTCT GAGCGGTTCG
CATATCGATA CCGTGGTTAA CGGCGGTAAC CTCGACGGGC AATTCGGCGC GCTGGCGGCG
TGGCTGGCAA TTGACTGGCT GAAAACGCAA TACGGCGCAC CGTTACGTAC GGTCGAAGTG
GTGGCGATGG CAGAAGAAGA AGGCAGCCGC TTCCCGTATG TCTTCTGGGG CAGTAAAAAT
ATCTTTGGGC TGGCGAATCC TGACGACGTG CGGAATATCT GTGATGCCAA AGGAAATAGT
TTTGTCGATG CGATGAAGGC TTGCGGATTT ACTCTGCCGG ACGCCCCGCT AACTCCGCGT
CAGGATATTA AAGCCTTTGT CGAACTGCAT ATCGAACAGG GCTGTGTGCT GGAAAGTAAT
GGGCAATCAA TTGGCGTGGT GAATGCAATT GTCGGGCAAC GTCGCTATAC GGTGACGCTG
AACGGCGAAT CAAACCATGC AGGCACCACG CCGATGGGTT ATCGTCGTGA TACGGTTTAC
GCTTTCAGTC GCATTTGCCA TCAGTCGATC GAAAAAGCGA AAAAGATGGG CGATCCGCTG
GTTCTGACCT TTGGGAAAGT AGAGCCGCGC CCGAATACGG TGAATGTGGT GCCGGGTAAA
ACCACGTTCA CCATTGATTG TCGTCATACC GACGCCGCCG TGCTGCGTGA TTTCACCCAA
CAGTTAGAAA ACGACATGCG GGCGATTTGC GATGAAATGG ACATTGGTAT TGATATCGAT
TTATGGATGG ACGAAGAACC CGTGCCGATG AATAAGGACC TGGTCGCCAC CCTGACAGAA
TTGTGTGAAA GTGAAAAACT GAATTACCGG GTGATGCACA GTGGTGCCGG GCACGACGCG
CAAATTTTCG CGCCTCGCGT GCCGACCTGC ATGATTTTCA TTCCCAGCAT CAACGGGATC
AGCCATAACC CGGCGGAACG CACCAATATT ACCGACCTTG CCGAAGGGGT CAAAACGTTG
GCACTCATGC TTTATCAACT TGCCTGGCAG AAATAA
|
|---|
| Protein sequence | MITHFRQAIE EALPWLSSFG ADPTGGMTRL LYSPEWLETQ QQFKKRMAAS GLETRFDEVG
NLYGRLNGTE YPQEVILSGS HIDTVVNGGN LDGQFGALAA WLAIDWLKTQ YGAPLRTVEV
VAMAEEEGSR FPYVFWGSKN IFGLANPDDV RNICDAKGNS FVDAMKACGF TLPDAPLTPR
QDIKAFVELH IEQGCVLESN GQSIGVVNAI VGQRRYTVTL NGESNHAGTT PMGYRRDTVY
AFSRICHQSI EKAKKMGDPL VLTFGKVEPR PNTVNVVPGK TTFTIDCRHT DAAVLRDFTQ
QLENDMRAIC DEMDIGIDID LWMDEEPVPM NKDLVATLTE LCESEKLNYR VMHSGAGHDA
QIFAPRVPTC MIFIPSINGI SHNPAERTNI TDLAEGVKTL ALMLYQLAWQ K
|
|---|
| |