| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0578 |
|---|
| Symbol | |
|---|
| ID | 5591475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 590872 |
|---|
| End bp | 591798 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640919762 |
|---|
| Product | DNA-binding transcriptional activator AllS |
|---|
| Protein accession | YP_001457345 |
|---|
| Protein GI | 157160027 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 61 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATC CAGAAACCTT GCGGACTTTC ATTGCGGTTG CTGAAACAGG AGGTTTTTCA
AAAGCGGCAG AACGATTATG TAAAACCACG GCGACGATCA GTTATCGCAT TAAACTTCTG
GAAGAGAATA CCGGAGTAGC GCTGTTTTTC CGTACGACTC GCAGCGTGAC GTTGACAGCG
GCTGGCGAGC ATCTACTTTC CCAGGCCAGA GACTGGCTGA GCTGGCTGGA AAGTATGCCA
AGCGAGCTGC AACAGGTGAA TGATGGCGTG GAACGCCAGG TGAATATTGT CATCAACAAC
CTGCTCTACA ACCCCCAGGC CGTCGCCCAG TTGCTGGCGT GGCTGAATGA GCGTTACCCC
TTTACCCAGT TTCACATCTC CCGACAAATC TATATGGGCG TCTGGGACTC GCTATTGTAC
GAAGGTTTTT CGCTGGCTAT CGGCGTCACG GGAACTGAGG CGCTGGCAAA TACCTTTAGT
CTTGATCCCT TAGGATCGGT GCAATGGCGC TTTGTCATGG CGGCGGATCA TCCGCTGGCG
AACGTTGAAG AGCCGCTAAC AGAAGCGCAG TTGCGGCGCT TTCCGGCGGT CAATATTGAA
GACAGCGCCC GCACCTTAAC CAAACGCGTC GCCTGGCGAT TGCCAGGGCA AAAAGAGATT
ATTGTTCCCG ATATGGAAAC GAAAATCGCC GCCCATCTGG CGGGCGTTGG CATTGGTTTT
TTGCCAAAAT CGCTTTGCCA GTCAATGATC GATAATCAAC AACTGGTCAG CCGGGTAATC
CCAACGATGC GCCCTCCTTC GCCATTGAGT CTGGCATGGC GCAAATTTGG CAGCGGCAAA
GCGGTAGAAG ATATTGTGAC CTTGTTTACC CAGCGCAGGC CGGAAATCAG CGGATTTTTA
GAAATTTTCG GCAACCCACG CAGTTAA
|
|---|
| Protein sequence | MFDPETLRTF IAVAETGGFS KAAERLCKTT ATISYRIKLL EENTGVALFF RTTRSVTLTA
AGEHLLSQAR DWLSWLESMP SELQQVNDGV ERQVNIVINN LLYNPQAVAQ LLAWLNERYP
FTQFHISRQI YMGVWDSLLY EGFSLAIGVT GTEALANTFS LDPLGSVQWR FVMAADHPLA
NVEEPLTEAQ LRRFPAVNIE DSARTLTKRV AWRLPGQKEI IVPDMETKIA AHLAGVGIGF
LPKSLCQSMI DNQQLVSRVI PTMRPPSPLS LAWRKFGSGK AVEDIVTLFT QRRPEISGFL
EIFGNPRS
|
|---|
| |