Gene EcHS_A0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0570 
Symbol 
ID5594668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp582749 
End bp583528 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content46% 
IMG OID640919755 
Producthypothetical protein 
Protein accessionYP_001457338 
Protein GI157160020 
COG category[R] General function prediction only 
COG ID[COG0390] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID[TIGR00245] conserved hypothetical protein TIGR00245 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCGC ATAATATTAC TAACGAATCA TTAGCACTGG CATTAATGCT GGTGGTGGTG 
GCAATCTTAA TTAGCCATAA AGAAAAACTG GCGCTGGAGA AAGATATTCT CTGGAGCGTC
GGGCGAGCGA TAATTCAGCT GATTATTGTC GGCTATGTGC TGAAGTATAT TTTCAGCGTG
GATGATGCCA GCCTGACATT ATTGATGGTG TTATTTATCT GCTTTAATGC GGCGTGGAAC
GCGCAAAAAC GCAGTAAATA TATTGCTAAA GCTTTTATCT CATCGTTTAT TGCCATTACG
GTCGGGGCGG GAATTACCCT GGCGGTGCTG ATTCTCTCAG GGTCGATTGA ATTTATCCCG
ATGCAGGTGA TCCCTATCGC CGGGATGATT GCCGGTAACG CCATGGTAGC GGTGGGGTTG
TGTTACAACA ATTTAGGGCA ACGGGTCATT AGCGAACAGC AACAGATTCA GGAGAAACTG
AGTCTTGGCG CGACGCCGAA GCAGGCTTCA GCGATATTGA TTCGCGACAG TATTCGCGCG
GCTTTAATTC CGACGGTCGA TTCAGCAAAA ACGGTTGGCT TAGTGAGTTT ACCAGGAATG
ATGTCCGGGC TGATATTTGC CGGGATTGAT CCGGTGAAGG CGATTAAATA TCAGATTATG
GTGACCTTTA TGCTGCTCTC AACCGCCAGC TTGTCGACCA TTATTGCCTG CTATTTAACC
TATCGTAAGT TTTATAATTC GCGCCACCAG TTGGTGGTGA CGCAATTGAA GAAGAAATGA
 
Protein sequence
MNSHNITNES LALALMLVVV AILISHKEKL ALEKDILWSV GRAIIQLIIV GYVLKYIFSV 
DDASLTLLMV LFICFNAAWN AQKRSKYIAK AFISSFIAIT VGAGITLAVL ILSGSIEFIP
MQVIPIAGMI AGNAMVAVGL CYNNLGQRVI SEQQQIQEKL SLGATPKQAS AILIRDSIRA
ALIPTVDSAK TVGLVSLPGM MSGLIFAGID PVKAIKYQIM VTFMLLSTAS LSTIIACYLT
YRKFYNSRHQ LVVTQLKKK