Gene EcHS_A0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0476 
Symboltgt 
ID5593938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp489929 
End bp491056 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content51% 
IMG OID640919659 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_001457244 
Protein GI157159926 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00449] tRNA-guanine transglycosylases, various specificities
[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTG AACTGGACAC CACCGACGGT CGCGCACGCC GTGGCCGCCT GGTCTTTGAT 
CGTGGCGTAG TGGAAACGCC TTGTTTTATG CCTGTTGGCA CCTACGGCAC CGTAAAAGGG
ATGACGCCGG AAGAAGTTGA AGCCACTGGC GCGCAAATTA TCCTCGGCAA CACCTTCCAC
CTGTGGCTGC GCCCGGGCCA GGAAATCATG AAACTGCACG GCGATCTGCA CGATTTTATG
CAGTGGAAGG GGCCGATCCT CACCGACTCC GGCGGCTTCC AGGTCTTCAG CCTTGGCGAT
ATTCGTAAAA TCACCGAACA GGGCGTGCAC TTCCGTAACC CGATCAACGG CGATCCGATT
TTCCTCGATC CTGAAAAATC AATGGAGATT CAGTACGATC TTGGTTCGGA TATCGTCATG
ATCTTTGATG AGTGTACGCC GTATCCTGCT GACTGGGATT ACGCAAAACG CTCCATGGAG
ATGTCTCTGC GTTGGGCGAA GCGTAGCCGT GAGCGTTTTG ACAGTCTCGG AAACAAAAAT
GCGCTGTTTG GTATCATTCA GGGCAGCGTT TACGAAGATT TACGTGATAT TTCTGTTAAA
GGTCTGGTAG ATATCGGTTT TGATGGCTAC GCTGTCGGCG GTCTGGCTGT GGGTGAGCCG
AAAGCAGATA TGCACCGCAT TCTGGAGCAT GTATGCCCGC AAATTCCGGC AGACAAACCG
CGTTACCTGA TGGGCGTTGG TAAACCAGAA GACCTGGTTG AAGGCGTACG TCGTGGTATC
GATATGTTTG ACTGCGTAAT GCCAACCCGC AACGCCCGAA ATGGTCATTT GTTCGTGACC
GATGGCGTGG TGAAAATCCG CAATGCGAAG TATAAGAGCG ATACTGGCCC ACTCGATCCT
GAGTGTGATT GCTACACCTG TCGCAATTAT TCACGCGCTT ACTTGCATCA TCTTGACCGT
TGCAACGAAA TATTAGGCGC GCGACTCAAC ACCATTCATA ACCTTCGTTA CTACCAGCGT
TTGATGGCGG GTTTACGCAA GGCTATTGAA GAGGGTAAAT TAGAGAGCTT CGTAACTGAT
TTTTACCAGC GTCAGGGGCG AGAAGTACCA CCTTTGAACG TTGATTAA
 
Protein sequence
MKFELDTTDG RARRGRLVFD RGVVETPCFM PVGTYGTVKG MTPEEVEATG AQIILGNTFH 
LWLRPGQEIM KLHGDLHDFM QWKGPILTDS GGFQVFSLGD IRKITEQGVH FRNPINGDPI
FLDPEKSMEI QYDLGSDIVM IFDECTPYPA DWDYAKRSME MSLRWAKRSR ERFDSLGNKN
ALFGIIQGSV YEDLRDISVK GLVDIGFDGY AVGGLAVGEP KADMHRILEH VCPQIPADKP
RYLMGVGKPE DLVEGVRRGI DMFDCVMPTR NARNGHLFVT DGVVKIRNAK YKSDTGPLDP
ECDCYTCRNY SRAYLHHLDR CNEILGARLN TIHNLRYYQR LMAGLRKAIE EGKLESFVTD
FYQRQGREVP PLNVD