| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0407 |
|---|
| Symbol | lacY |
|---|
| ID | 5594579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 426432 |
|---|
| End bp | 427685 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640919592 |
|---|
| Product | galactoside permease |
|---|
| Protein accession | YP_001457177 |
|---|
| Protein GI | 157159859 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | [TIGR00882] oligosaccharide:H+ symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.00583816 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACTATT TAAAAAACAC AAACTTTTGG ATGTTCGGTT TATTCTTTTT CTTTTACTTT
TTTATCATGG GAGCCTACTT CCCGTTTTTC CCGATTTGGC TACATGACAT CAACCATATC
AGCAAAAGTG ATACGGGTAT TATTTTTGCT GCTATTTCTC TGTTCTCGCT ATTATTCCAA
CCGCTGTTTG GTCTGCTTTC TGACAAACTC GGGCTGCGCA AATACCTGCT GTGGATTATT
ACCGGCATGT TAGTGATGTT TGCGCCGTTC TTTATTTTTA TCTTCGGGCC ACTGTTACAA
TACAACATTT TAGTAGGATC GATTGTTGGT GGTATTTATC TAGGCTTTTG TTTTAACGCC
GGTGCGCCCG CAGTAGAGGC ATTTATCGAG AAAGTCAGCC GTCGCAGTAA TTTCGAATTT
GGTCGCGCGC GGATGTTTGG CTGTGTTGGC TGGGCGCTGT GTGCCTCGAT TGTCGGCATC
ATGTTCACCA TCAATAATCA GTTCGTTTTC TGGCTGGGTT CTGGCTGTGC ACTCATCCTC
GCCATTTTAC TCTTTTTCGC CAAAACGGAT GCGCCCTCTT CCGCCACGGT TGCCAATGCG
GTAGGTGCCA ACCATTCGGC ATTTAGCCTT AAACTGGCGC TGGAACTGTT CAGACAGCCA
AAACTGTGGT TTTTGTCACT GTATGTTATT GGCGTTTCCT GCACCTACGA TGTTTTTGAC
CAACAGTTTG CTAATTTCTT TACTTCTTTC TTTGCCACCG GTGAACAGGG TACGCGGGTA
TTTGGCTACG TAACGACAAT GGGCGAATTA CTTAACGCCT CGATTATGTT CTTTGCGCCA
CTGATCATTA ATCGCATCGG TGGGAAAAAC GCCCTGCTGC TGGCTGGCAC TATTATGTCT
GTACGTATTA TTGGCTCATC GTTCGCCACC TCAGCGCTGG AAGTGGTTAT TCTGAAAACG
CTGCATATGT TTGAAGTACC GTTCCTGCTG GTGGGCTGCT TTAAATATAT TACCAGCCAG
TTTGAAGTGC GTTTTTCAGC GACGATTTAT CTGGTCTGTT TCTGCTTCTT TAAGCAACTG
GCGATGATTT TTATGTCTGT ACTGGCGGGC AATATGTATG AAAGCATCGG TTTCCAGGGC
GCTTATCTGG TGCTGGGTCT GGTGGCGCTG GGCTTCACCT TAATTTCCGT GTTCACGCTT
AGCGGCCCCG GCCCGCTTTC CCTGCTGCGT CGTCAGGTGA ATGAAGTCGC TTAA
|
|---|
| Protein sequence | MYYLKNTNFW MFGLFFFFYF FIMGAYFPFF PIWLHDINHI SKSDTGIIFA AISLFSLLFQ
PLFGLLSDKL GLRKYLLWII TGMLVMFAPF FIFIFGPLLQ YNILVGSIVG GIYLGFCFNA
GAPAVEAFIE KVSRRSNFEF GRARMFGCVG WALCASIVGI MFTINNQFVF WLGSGCALIL
AILLFFAKTD APSSATVANA VGANHSAFSL KLALELFRQP KLWFLSLYVI GVSCTYDVFD
QQFANFFTSF FATGEQGTRV FGYVTTMGEL LNASIMFFAP LIINRIGGKN ALLLAGTIMS
VRIIGSSFAT SALEVVILKT LHMFEVPFLL VGCFKYITSQ FEVRFSATIY LVCFCFFKQL
AMIFMSVLAG NMYESIGFQG AYLVLGLVAL GFTLISVFTL SGPGPLSLLR RQVNEVA
|
|---|
| |