| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0235 |
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| Symbol | |
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| ID | 5592002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 254623 |
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| End bp | 256473 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640919422 |
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| Product | hypothetical protein |
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| Protein accession | YP_001457009 |
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| Protein GI | 157159691 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTG AAGAACGCTA TTTCCGGGAA GAACTCGATT ACCTGCGCCA GCTTAGCAAG
CTGCTGGCAA CGGAAAAACC CCATCTGGCC CGCTTCCTGG CCGAAAAAGA TGCGGATCCG
GATATTGAAC GCCTGCTGGA AGGGGTGGCT TTTCTTACCG GCAATCTCCG CCAGAAAATT
GAGGATGAAT TCCCAGAACT GACGCACGGG CTTATTAAGA TGCTATGGCC TAATTACCTG
CGTCCGGTTC CGGCAATGAC CCTTATTGAA TATACGCCGG ATATGGATAA GTCTTCTGTA
CCGGTGTTAA TCCCCCGTAA TGAGCAGTTT ACAACCAACG CCGGGGAAAT CAGAGTTGAT
GAAGTGCTGC CCTCTGATGC TAAAAAGGAG GAGCCGCCTC CCTGTACCTT CACTCTCTGC
CGGGATATCT GGCTGCTGCC CGTTCGCCTG GAGCAGATTG AAAACCGCAG TACGACCCGT
AATGGTGTTA TCAACATCAC CTTTTCGGTC GCACCGGGAA CGGACTTCCG CACGCTGGAT
CTGAACAAAC TTCGCTTCTG GCTCGGCAAT GACGACAACT ATACCCGTGA CCAGCTTTAT
TTATGGTTCT GCGAATACTT GCAGGGTGCC GACCTGACTG TGGGTGAACA GCATATTCGC
CTGCCTGAGT TTATGCTAAA AGCTGTCGGT TTTGAGCCGC AGGATGCCAT GCTGCCCTGG
CCGAAAAACG TCCACAGCGG CTACCGGATC CTTCAGGAGT ATTTCTGTTA CCCCGATGCG
TTTCTCTTTT TTGATCTTTG TGGTTGTCCG GCTTTGCCTG ACGGATTGCA GGCGGAATTC
TTTACCCTGC AACTGCGTTT TTCGCGCCCT TTGCCCGTGG ACATCCGGCT GCGCCGCGAT
TCCCTGCGCC TGTATTGCGC ACCTGCCATT AATTTATTTA TCCACCATGC AGAAGCCATC
ACGCTGGACA ACCGGCGGGC AGACTATCCG CTGGTTCCCA GCCGCCATTA CCCACAACAT
TACGATGTAT TTTCCGTTAA CAGTGTGGTG AGCCAGGTCC AGGATATGTT CAGGAAAAAA
GATCTGGGGC GTCCTGTTTC GACGCAGGCC GCGCGCCAGT GGCCAGCCTT TGAAAGTTTC
AGCCATCAGA TGGAATACAG CCGGAAGCGG GAAGTGGTGT ACTGGCATCA CCGGACCAAA
ACATCCCTGT TCCATCGCGG CTTTGATCAT ACCCTTGCCT TTATACATGC TGATGGCAGT
TATCCGTCAG ACGAATCTCT GCTCAGTAAT GAAGTGGTTT CGGTATCGCT GACCTGTACC
AACCGTGAGC TTCCGTCACA AATTCGTTCC GGCGATATCA CCGGCACAAC CGGTAAAAAT
GCAGCTGTTG CTTCATTTCG CAACATTACC CGCCCGACGC AACCACTCTG GCCGGTCATT
GATGGCAGCC TGCACTGGTC CCTACTCTCC GCCATGAACC TGAATTATCT GTCATTACTG
GATACGGACG CGCTGAAGCA GGTCATCGCC AACTTTGATC GCCACGCAAT CCATCATCCG
CAGACGGCAC GGCTGTCACA ACAAAAGCTG GATGCCATTG AGCGTCTGGA GACCCGCCCC
GTTGATCGCC TGTTTACGGG TATTCCCGTC CGGGGACTGG CCTCCACGCT GTATCTGCAC
CCGGAGCCGT TTGTCTGTGA AGGGGAAATG TATCTGCTCG GTACGGTGCT TTCGCATTTT
CTGTCGCTGT ACGCCAGCGT TAACTCATTC CACATGCTGA CCGTTGTGAA CACAGAAAGC
CAGGAGACAT GGAAATGGAC GGAAAGAATC GGGCAGCATC CTCTTATCTG A
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| Protein sequence | MEFEERYFRE ELDYLRQLSK LLATEKPHLA RFLAEKDADP DIERLLEGVA FLTGNLRQKI
EDEFPELTHG LIKMLWPNYL RPVPAMTLIE YTPDMDKSSV PVLIPRNEQF TTNAGEIRVD
EVLPSDAKKE EPPPCTFTLC RDIWLLPVRL EQIENRSTTR NGVINITFSV APGTDFRTLD
LNKLRFWLGN DDNYTRDQLY LWFCEYLQGA DLTVGEQHIR LPEFMLKAVG FEPQDAMLPW
PKNVHSGYRI LQEYFCYPDA FLFFDLCGCP ALPDGLQAEF FTLQLRFSRP LPVDIRLRRD
SLRLYCAPAI NLFIHHAEAI TLDNRRADYP LVPSRHYPQH YDVFSVNSVV SQVQDMFRKK
DLGRPVSTQA ARQWPAFESF SHQMEYSRKR EVVYWHHRTK TSLFHRGFDH TLAFIHADGS
YPSDESLLSN EVVSVSLTCT NRELPSQIRS GDITGTTGKN AAVASFRNIT RPTQPLWPVI
DGSLHWSLLS AMNLNYLSLL DTDALKQVIA NFDRHAIHHP QTARLSQQKL DAIERLETRP
VDRLFTGIPV RGLASTLYLH PEPFVCEGEM YLLGTVLSHF LSLYASVNSF HMLTVVNTES
QETWKWTERI GQHPLI
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